RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ADHFE1Q8IWW8 467 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 LMBR1Q8WVP7 490 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 C11orf84Q9BUA3 381 aaPredicted RBP18.2■□□□□ 0.5
LMNA-223ENST00000515459 LMAN2LQ9H0V9 348 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 RWDD3Q9Y3V2 267 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 NRCAMQ92823 1304 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 ERICH2A1L162 156 aa18.19■□□□□ 0.5
LMNA-223ENST00000515459 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
LMNA-223ENST00000515459 BMPR1AP36894 532 aa18.19■□□□□ 0.5
LMNA-223ENST00000515459 LTBRP36941 435 aa18.19■□□□□ 0.5
LMNA-223ENST00000515459 SEMA3FQ13275 785 aa18.19■□□□□ 0.5
LMNA-223ENST00000515459 RPAINQ86UA6 219 aa18.19■□□□□ 0.5
LMNA-223ENST00000515459 SENP7Q9BQF6 1050 aa18.19■□□□□ 0.5
LMNA-223ENST00000515459 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
LMNA-223ENST00000515459 CHRNA1P02708 482 aa18.18■□□□□ 0.5
LMNA-223ENST00000515459 SP4Q02446 784 aa18.18■□□□□ 0.5
LMNA-223ENST00000515459 CTC1Q2NKJ3 1217 aa18.18■□□□□ 0.5
LMNA-223ENST00000515459 KCNH6Q9H252 994 aa18.18■□□□□ 0.5
LMNA-223ENST00000515459 PIEZO1Q92508 2521 aa18.18■□□□□ 0.5
LMNA-223ENST00000515459 ADGRA3Q8IWK6 1321 aa18.18■□□□□ 0.5
LMNA-223ENST00000515459 MYO7AQ13402 2215 aa18.18■□□□□ 0.5
LMNA-223ENST00000515459 GRM6O15303 877 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 LINC00271P0C7V0 271 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 GHRP10912 638 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 IRS1P35568 1242 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 TROAPQ12815 778 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 SMAD2Q15796 467 aaKnown RBP18.17■□□□□ 0.5
LMNA-223ENST00000515459 PCNX4Q63HM2 1172 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 TAF2Q6P1X5 1199 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 GIMAP8Q8ND71 665 aaPredicted RBP18.17■□□□□ 0.5
LMNA-223ENST00000515459 SMARCC2Q8TAQ2 1214 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 IL25Q9H293 177 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 EHMT1Q9H9B1 1298 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 TELO2Q9Y4R8 837 aa18.17■□□□□ 0.5
LMNA-223ENST00000515459 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
LMNA-223ENST00000515459 IGHDP01880 384 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 TCF7P36402 384 aaPredicted RBP18.16■□□□□ 0.5
LMNA-223ENST00000515459 HYAL1Q12794 435 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 WTAPQ15007 396 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 SART3Q15020 963 aaKnown RBP18.16■□□□□ 0.5
LMNA-223ENST00000515459 XRRA1Q6P2D8 792 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 RSPH3Q86UC2 560 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 NLRX1Q86UT6 975 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 PIBF1Q8WXW3 757 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 CLP1Q92989 425 aaKnown RBP18.16■□□□□ 0.5
LMNA-223ENST00000515459 CUL5Q93034 780 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 POP1Q99575 1024 aaKnown RBP18.16■□□□□ 0.5
LMNA-223ENST00000515459 RC3H2Q9HBD1 1191 aaKnown RBP18.16■□□□□ 0.5
LMNA-223ENST00000515459 SENP2Q9HC62 589 aa18.16■□□□□ 0.5
LMNA-223ENST00000515459 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
LMNA-223ENST00000515459 TTC3P53804 2025 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 ENPP3O14638 875 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 MBTPS2O43462 519 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 MRE11P49959 708 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 NHLH1Q02575 133 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 DLX2Q07687 328 aaPredicted RBP18.15■□□□□ 0.5
LMNA-223ENST00000515459 BTG3Q14201 252 aaPredicted RBP18.15■□□□□ 0.5
LMNA-223ENST00000515459 LPIN1Q14693 890 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 CLUL1Q15846 466 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 USP17L6PQ6QN14 398 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 RUFY4Q6ZNE9 571 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 RALYLQ86SE5 291 aaKnown RBP18.15■□□□□ 0.5
LMNA-223ENST00000515459 FBXL18Q96ME1 805 aa18.15■□□□□ 0.5
LMNA-223ENST00000515459 PIK3CDO00329 1044 aa18.14■□□□□ 0.49
LMNA-223ENST00000515459 CYP21A2P08686 494 aa18.14■□□□□ 0.49
LMNA-223ENST00000515459 MGAT3Q09327 533 aa18.14■□□□□ 0.49
LMNA-223ENST00000515459 PPFIA1Q13136 1202 aa18.14■□□□□ 0.49
LMNA-223ENST00000515459 CATIPQ7Z7H3 387 aa18.14■□□□□ 0.49
LMNA-223ENST00000515459 NCOA7Q8NI08 942 aa18.14■□□□□ 0.49
LMNA-223ENST00000515459 ZNF689Q96CS4 500 aaPredicted RBP18.14■□□□□ 0.49
LMNA-223ENST00000515459 PLVAPQ9BX97 442 aa18.14■□□□□ 0.49
LMNA-223ENST00000515459 TUBE1Q9UJT0 475 aa18.14■□□□□ 0.49
LMNA-223ENST00000515459 TBX10O75333 385 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 DGKIO75912 1065 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 MMP1P03956 469 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 SMAD4Q13485 552 aaKnown RBP18.13■□□□□ 0.49
LMNA-223ENST00000515459 GRIK4Q16099 956 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 FBXO47Q5MNV8 452 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 HFE2Q6ZVN8 426 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 DNAJB3Q8WWF6 145 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 GPRASP2Q96D09 838 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 RRP36Q96EU6 259 aaKnown RBP18.13■□□□□ 0.49
LMNA-223ENST00000515459 CDHR1Q96JP9 859 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 IGFLR1Q9H665 355 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 ERAP1Q9NZ08 941 aa18.13■□□□□ 0.49
LMNA-223ENST00000515459 KIAA1671Q9BY89 1806 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 MEIS2O14770 477 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 CSPG5O95196 566 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 MARK3P27448 753 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 HERC4Q5GLZ8 1057 aaPredicted RBP18.12■□□□□ 0.49
LMNA-223ENST00000515459 TSHZ1Q6ZSZ6 1077 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 SEPT1Q8WYJ6 367 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 P2RX5Q93086 422 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 PPP2R3CQ969Q6 453 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 MFSD14AQ96MC6 490 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 SPZ1Q9BXG8 430 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
LMNA-223ENST00000515459 SEC63Q9UGP8 760 aaKnown RBP18.12■□□□□ 0.49
LMNA-223ENST00000515459 MUTYHQ9UIF7 546 aa18.12■□□□□ 0.49
LMNA-223ENST00000515459 CD207Q9UJ71 328 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms