RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 LHX8Q68G74 356 aa18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 HAS1Q92839 578 aa18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 SLC5A5Q92911 643 aa18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 ZNF577Q9BSK1 485 aa18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 WDR11Q9BZH6 1224 aa18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 SENP6Q9GZR1 1112 aaPredicted RBP18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 TMEM60Q9H2L4 133 aa18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 ABHD16BQ9H3Z7 469 aa18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 PCDHA7Q9UN72 937 aa18.74■□□□□ 0.59
SNCAIP-220ENST00000514497 NCOR1O75376 2440 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 SLC26A4O43511 780 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 IGHA2P01877 340 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 CACNB2Q08289 660 aaPredicted RBP18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 ARMCX2Q7L311 632 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 USP38Q8NB14 1042 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 NPLOC4Q8TAT6 608 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 CYP2W1Q8TAV3 490 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 CHAMP1Q96JM3 812 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 GDPD2Q9HCC8 539 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 AGO4Q9HCK5 861 aaKnown RBP18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 NFASCO94856 1347 aa18.73■□□□□ 0.59
SNCAIP-220ENST00000514497 RBM47A0AV96 593 aaKnown RBP18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 PRPF40AO75400 957 aaKnown RBP18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 CMA1P23946 247 aa18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 MARCKSP29966 332 aaPredicted RBP18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 CCND3P30281 292 aaPredicted RBP18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 TXKP42681 527 aa18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 AXDND1Q5T1B0 1012 aaPredicted RBP18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 IGSF22Q8N9C0 903 aa18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 SCFD2Q8WU76 684 aa18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 TTC12Q9H892 705 aaPredicted RBP18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 LMBRD1Q9NUN5 540 aa18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.72■□□□□ 0.59
SNCAIP-220ENST00000514497 VWA3AA6NCI4 1184 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 PSMD10O75832 226 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 RGS20O76081 388 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 ARP10275 920 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 ATN1P54259 1190 aaPredicted RBP18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 PPP2R5CQ13362 524 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 NEDD9Q14511 834 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 LRCH2Q5VUJ6 765 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 KCTD17Q8N5Z5 321 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 PYM1Q9BRP8 204 aaKnown RBP18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 TCEAL9Q9UHQ7 104 aa18.71■□□□□ 0.59
SNCAIP-220ENST00000514497 GAS7O60861 476 aa18.7■□□□□ 0.58
SNCAIP-220ENST00000514497 SNAI1O95863 264 aaPredicted RBP18.7■□□□□ 0.58
SNCAIP-220ENST00000514497 TTLL4Q14679 1199 aa18.7■□□□□ 0.58
SNCAIP-220ENST00000514497 RDM1Q8NG50 284 aa18.7■□□□□ 0.58
SNCAIP-220ENST00000514497 SDF4Q9BRK5 362 aa18.7■□□□□ 0.58
SNCAIP-220ENST00000514497 TEKT3Q9BXF9 490 aa18.7■□□□□ 0.58
SNCAIP-220ENST00000514497 MRVI1Q9Y6F6 885 aa18.7■□□□□ 0.58
SNCAIP-220ENST00000514497 FAM237AA0A1B0GTK4 181 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 NKRFO15226 690 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 MBD3O95983 291 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 KCNA2P16389 499 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 TXLNAP40222 546 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 KRT76Q01546 638 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 ACVR2BQ13705 512 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 SKOR2Q2VWA4 1001 aaPredicted RBP18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 MFSD14CQ5VZR4 134 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 RESP18Q5W5W9 173 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 IQSEC1Q6DN90 963 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 SEPT14Q6ZU15 432 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 KATNBL1Q9H079 304 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 CSRNP2Q9H175 543 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 FAM13BQ9NYF5 915 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 LRWD1Q9UFC0 647 aa18.69■□□□□ 0.58
SNCAIP-220ENST00000514497 DHX15O43143 795 aaKnown RBP18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 MUTP22033 750 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 SFNP31947 248 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 TECP42680 631 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 RTP1P59025 263 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 SEMA3FQ13275 785 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 NFKBIBQ15653 356 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 IL17AQ16552 155 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 ZNF746Q6NUN9 644 aaPredicted RBP18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 TAPT1Q6NXT6 567 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 B3GNT9Q6UX72 402 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 SMAP1Q8IYB5 467 aaPredicted RBP18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 ERMNQ8TAM6 284 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 MRPS27Q92552 414 aaKnown RBP18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 CCSER1Q9C0I3 900 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 DDX41Q9UJV9 622 aaKnown RBP18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 BDP1A6H8Y1 2624 aa18.68■□□□□ 0.58
SNCAIP-220ENST00000514497 UBA7P41226 1012 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 SPIRE1Q08AE8 756 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 CCL14Q16627 93 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 HAUS3Q68CZ6 603 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 CCDC62Q6P9F0 684 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 NEK9Q8TD19 979 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 ADAMTS19Q8TE59 1207 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 CLIC6Q96NY7 704 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 VAV3Q9UKW4 847 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 ATP11BQ9Y2G3 1177 aa18.67■□□□□ 0.58
SNCAIP-220ENST00000514497 WDR81Q562E7 1941 aa18.66■□□□□ 0.58
SNCAIP-220ENST00000514497 LOXHD1Q8IVV2 1947 aa18.66■□□□□ 0.58
SNCAIP-220ENST00000514497 ATP9AO75110 1047 aa18.66■□□□□ 0.58
SNCAIP-220ENST00000514497 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
SNCAIP-220ENST00000514497 JAK3P52333 1124 aa18.66■□□□□ 0.58
SNCAIP-220ENST00000514497 ITGB3BPQ13352 177 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms