RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SMARCAD1Q9H4L7 1026 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 AZI2Q9H6S1 392 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 BCAS3Q9H6U6 928 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 SETD4Q9NVD3 440 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 BARHL2Q9NY43 387 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 ERAP1Q9NZ08 941 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 BRPF3Q9ULD4 1205 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 NAP1L2Q9ULW6 460 aaPredicted RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 UBIAD1Q9Y5Z9 338 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 EYSQ5T1H1 3165 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 RRN3P2A6NIE6 340 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 GOLGA8AA7E2F4 631 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 GOLGA8BA8MQT2 603 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 MEIS1O00470 390 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 TREHO43280 583 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 NBNO60934 754 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 ATP9AO75110 1047 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 AMHP03971 560 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 CA3P07451 260 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 MYOGP15173 224 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 KCNA2P16389 499 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 GNA11P29992 359 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 HOXC8P31273 242 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 HSPA4P34932 840 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 ADD1P35611 737 aaKnown RBP8.34□□□□□ -1.07
HTT-212ENST00000513639 TCF7P36402 384 aaPredicted RBP8.34□□□□□ -1.07
HTT-212ENST00000513639 METAP2P50579 478 aaKnown RBP eCLIP8.34□□□□□ -1.07
HTT-212ENST00000513639 WDR5P61964 334 aaKnown RBP8.34□□□□□ -1.07
HTT-212ENST00000513639 FUT2Q10981 343 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 SEMA3FQ13275 785 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 AP3B2Q13367 1082 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 ADCK5Q3MIX3 580 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 CEP55Q53EZ4 464 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 WWC2Q6AWC2 1192 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 TAF2Q6P1X5 1199 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 RPAINQ86UA6 219 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 RAB11FIP4Q86YS3 637 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 BICD2Q8TD16 824 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 ATXN2LQ8WWM7 1075 aaKnown RBP8.34□□□□□ -1.07
HTT-212ENST00000513639 PPM1EQ8WY54 764 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 JAKMIP1Q96N16 626 aaKnown RBP8.34□□□□□ -1.07
HTT-212ENST00000513639 MXRA8Q9BRK3 442 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 SDF4Q9BRK5 362 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 C6orf50Q9HD87 102 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 KCNH7Q9NS40 1196 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 INSL6Q9Y581 213 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 LCTP09848 1927 aa8.34□□□□□ -1.07
HTT-212ENST00000513639 MYH6P13533 1939 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 GSTTP1A0A1W2PQM5 241 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 PRPF3O43395 683 aaKnown RBP8.33□□□□□ -1.08
HTT-212ENST00000513639 EIF5BO60841 1220 aaKnown RBP8.33□□□□□ -1.08
HTT-212ENST00000513639 GJB5O95377 273 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 SCG2P13521 617 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 SLC26A2P50443 739 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 MRPS5P82675 430 aaKnown RBP8.33□□□□□ -1.08
HTT-212ENST00000513639 ARHGAP4P98171 946 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 SP4Q02446 784 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 TAP1Q03518 808 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 COL9A3Q14050 684 aaPredicted RBP8.33□□□□□ -1.08
HTT-212ENST00000513639 ADGRE1Q14246 886 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 UBE2SQ16763 222 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 PFKFB3Q16875 520 aaPredicted RBP8.33□□□□□ -1.08
HTT-212ENST00000513639 AAK1Q2M2I8 961 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 PLEKHG4Q58EX7 1191 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 TJAP1Q5JTD0 557 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 Q6ZUG5 572 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 NIPA1Q7RTP0 329 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 PLPPR4Q7Z2D5 763 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 DBF4BQ8NFT6 615 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 APBB2Q92870 758 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 BRF1Q92994 677 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 TCEANC2Q96MN5 208 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 COL25A1Q9BXS0 654 aaPredicted RBP8.33□□□□□ -1.08
HTT-212ENST00000513639 JPH1Q9HDC5 661 aaPredicted RBP8.33□□□□□ -1.08
HTT-212ENST00000513639 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
HTT-212ENST00000513639 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 SLC9A2Q9UBY0 812 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 SNX14Q9Y5W7 946 aa8.33□□□□□ -1.08
HTT-212ENST00000513639 NFASCO94856 1347 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 LRRC37A2A6NM11 1700 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 STXBP3O00186 592 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 CYP3A4P08684 503 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 RPS6KB1P23443 525 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 CDC27P30260 824 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 STAT5BP51692 787 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 ADAM17P78536 824 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 APOBRQ0VD83 1088 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 PPFIA1Q13136 1202 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 HIC1Q14526 733 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
HTT-212ENST00000513639 FAM26DQ5JW98 314 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 IER5Q5VY09 327 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 ERICH6BQ5W0A0 696 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 SKAP1Q86WV1 359 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 NME8Q8N427 588 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 IL27Q8NEV9 243 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 LMBR1Q8WVP7 490 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 ARNTL2Q8WYA1 636 aa8.32□□□□□ -1.08
HTT-212ENST00000513639 ZMYND12Q9H0C1 365 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms