RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 LENG1Q96BZ8 264 aaPredicted RBP5.96□□□□□ -1.46
HTT-211ENST00000513326 TIFAQ96CG3 184 aa5.96□□□□□ -1.46
HTT-211ENST00000513326 SNX27Q96L92 541 aa5.96□□□□□ -1.46
HTT-211ENST00000513326 CCSER2Q9H7U1 834 aa5.96□□□□□ -1.46
HTT-211ENST00000513326 DNAJC18Q9H819 358 aa5.96□□□□□ -1.46
HTT-211ENST00000513326 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.96□□□□□ -1.46
HTT-211ENST00000513326 C9orf78Q9NZ63 289 aaPredicted RBP5.96□□□□□ -1.46
HTT-211ENST00000513326 GPN3Q9UHW5 284 aaPredicted RBP5.96□□□□□ -1.46
HTT-211ENST00000513326 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.96□□□□□ -1.46
HTT-211ENST00000513326 KIF16BQ96L93 1317 aa5.96□□□□□ -1.46
HTT-211ENST00000513326 XIRP2A4UGR9 3374 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 H3BRJ5 948 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 GDF11O95390 407 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 ESRRAP11474 423 aaPredicted RBP5.95□□□□□ -1.46
HTT-211ENST00000513326 MAPK4P31152 587 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 HOXA7P31268 230 aaPredicted RBP5.95□□□□□ -1.46
HTT-211ENST00000513326 ZEB1P37275 1124 aaPredicted RBP5.95□□□□□ -1.46
HTT-211ENST00000513326 CAP2P40123 477 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 MRPS5P82675 430 aaKnown RBP5.95□□□□□ -1.46
HTT-211ENST00000513326 EXOSC9Q06265 439 aaKnown RBP5.95□□□□□ -1.46
HTT-211ENST00000513326 RASGRF1Q13972 1273 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 ZNF423Q2M1K9 1284 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 CCDC184Q52MB2 194 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 FAM47AQ5JRC9 791 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 FAM117BQ6P1L5 589 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 SLC4A10Q6U841 1118 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 C16orf59Q7L2K0 433 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 WFDC8Q8IUA0 241 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.95□□□□□ -1.46
HTT-211ENST00000513326 SRA1Q9HD15 236 aaKnown RBP5.95□□□□□ -1.46
HTT-211ENST00000513326 ENAMQ9NRM1 1142 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 KBTBD4Q9NVX7 518 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 YBX2Q9Y2T7 364 aaKnown RBP5.95□□□□□ -1.46
HTT-211ENST00000513326 SAMM50Q9Y512 469 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 UTYO14607 1347 aa5.95□□□□□ -1.46
HTT-211ENST00000513326 GBF1Q92538 1859 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 PQBP1O60828 265 aaKnown RBP5.94□□□□□ -1.46
HTT-211ENST00000513326 CELA3AP09093 270 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 IFIT1P09914 478 aaKnown RBP5.94□□□□□ -1.46
HTT-211ENST00000513326 SLC5A1P13866 664 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 BACE1P56817 501 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 RACK1P63244 317 aaKnown RBP5.94□□□□□ -1.46
HTT-211ENST00000513326 PABPC4Q13310 644 aaKnown RBP eCLIP5.94□□□□□ -1.46
HTT-211ENST00000513326 LRRC41Q15345 812 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 AKNAD1Q5T1N1 836 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 WDR78Q5VTH9 848 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 MFSD14CQ5VZR4 134 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 KRT40Q6A162 431 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 C8orf86Q6ZUL3 223 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 LPIN2Q92539 896 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 WNT8BQ93098 351 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 EDC3Q96F86 508 aaKnown RBP5.94□□□□□ -1.46
HTT-211ENST00000513326 TMEM74Q96NL1 305 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 TRIM56Q9BRZ2 755 aaKnown RBP5.94□□□□□ -1.46
HTT-211ENST00000513326 OSBPL5Q9H0X9 879 aaPredicted RBP5.94□□□□□ -1.46
HTT-211ENST00000513326 SIL1Q9H173 461 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 SOX17Q9H6I2 414 aaPredicted RBP5.94□□□□□ -1.46
HTT-211ENST00000513326 CD320Q9NPF0 282 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 COPRSQ9NQ92 184 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 BTBD7Q9P203 1132 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 PCDHGB7Q9Y5F8 929 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 MROH7-TTC4A0A0A0MT08 1334 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 SALL1Q9NSC2 1324 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 PRRC2BQ5JSZ5 2229 aaKnown RBP5.94□□□□□ -1.46
HTT-211ENST00000513326 LRRC37A2A6NM11 1700 aa5.94□□□□□ -1.46
HTT-211ENST00000513326 GPR75-ASB3A0A0A6YYF3 556 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.93□□□□□ -1.46
HTT-211ENST00000513326 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.93□□□□□ -1.46
HTT-211ENST00000513326 EYA2O00167 538 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 KIAA0355O15063 1070 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 COBLO75128 1261 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 ALDH1L1O75891 902 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 CLTBP09497 229 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 ACRP10323 421 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 MYOGP15173 224 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 NME2P22392 152 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 GBP2P32456 591 aaPredicted RBP5.93□□□□□ -1.46
HTT-211ENST00000513326 ARL4DP49703 201 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 LIG3P49916 1009 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 RPS26P62854 115 aaKnown RBP5.93□□□□□ -1.46
HTT-211ENST00000513326 MECOMQ03112 1051 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 FPGSQ05932 587 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 GNL2Q13823 731 aaKnown RBP5.93□□□□□ -1.46
HTT-211ENST00000513326 GRB14Q14449 540 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 ZYXQ15942 572 aaKnown RBP5.93□□□□□ -1.46
HTT-211ENST00000513326 ATP2B3Q16720 1220 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 NAALADL2Q58DX5 795 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 TTBK2Q6IQ55 1244 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 DZIP1Q86YF9 867 aaKnown RBP5.93□□□□□ -1.46
HTT-211ENST00000513326 WHAMMQ8TF30 809 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 ANKS1AQ92625 1134 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 WDR18Q9BV38 432 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 C1QTNF1Q9BXJ1 281 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 NKX2-4Q9H2Z4 354 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 ACBD3Q9H3P7 528 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 TMOD4Q9NZQ9 345 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 ABCF2Q9UG63 623 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 CACNA1FO60840 1977 aa5.93□□□□□ -1.46
HTT-211ENST00000513326 SMCHD1A6NHR9 2005 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms