RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 ZNF618Q5T7W0 954 aa13.78□□□□□ -0.2
CDK7-208ENST00000512687 UTP14CQ5TAP6 766 aaKnown RBP13.78□□□□□ -0.2
CDK7-208ENST00000512687 NLRX1Q86UT6 975 aa13.78□□□□□ -0.2
CDK7-208ENST00000512687 MAFAQ8NHW3 353 aaPredicted RBP13.78□□□□□ -0.2
CDK7-208ENST00000512687 FTOQ9C0B1 505 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDK7-208ENST00000512687 BARHL2Q9NY43 387 aa13.78□□□□□ -0.2
CDK7-208ENST00000512687 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 TRANK1O15050 2925 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 TREHO43280 583 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 ARHGEF15O94989 841 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 CXCL10P02778 98 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 ATP2A2P16615 1042 aaKnown RBP13.77□□□□□ -0.21
CDK7-208ENST00000512687 FGD1P98174 961 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 MTMR1Q13613 665 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 TOB2Q14106 344 aaPredicted RBP13.77□□□□□ -0.21
CDK7-208ENST00000512687 PKN1Q16512 942 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 PFKFB3Q16875 520 aaPredicted RBP13.77□□□□□ -0.21
CDK7-208ENST00000512687 SERINC5Q86VE9 423 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 FBXL16Q8N461 479 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.21
CDK7-208ENST00000512687 CYP2W1Q8TAV3 490 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 USP26Q9BXU7 913 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 ANO3Q9BYT9 981 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 OSBPL7Q9BZF2 842 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 RNPEPQ9H4A4 650 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 PRDM12Q9H4Q4 367 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 JADE2Q9NQC1 790 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 MSRAQ9UJ68 235 aa13.77□□□□□ -0.21
CDK7-208ENST00000512687 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 GSTTP1A0A1W2PQM5 241 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 C17orf102A2RUQ5 167 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 SMCO2A6NFE2 343 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 STK25O00506 426 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 PPFIA3O75145 1194 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 ACTN1P12814 892 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 SCG2P13521 617 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 TCF7P36402 384 aaPredicted RBP13.76□□□□□ -0.21
CDK7-208ENST00000512687 WDR5P61964 334 aaKnown RBP13.76□□□□□ -0.21
CDK7-208ENST00000512687 NTRK3Q16288 839 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 TMCO2Q7Z6W1 182 aaPredicted RBP13.76□□□□□ -0.21
CDK7-208ENST00000512687 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 ATP6V0A1Q93050 837 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 PHKBQ93100 1093 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 MXRA8Q9BRK3 442 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 SETD4Q9NVD3 440 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 PCDHA11Q9Y5I1 949 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 RALGAPA2Q2PPJ7 1873 aa13.76□□□□□ -0.21
CDK7-208ENST00000512687 ARP10275 920 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 SREBF1P36956 1147 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 ADAM17P78536 824 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 DEFB103AP81534 67 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 ADGRE1Q14246 886 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 CNKSR3Q6P9H4 555 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 RUFY3Q7L099 469 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 GIMAP8Q8ND71 665 aaPredicted RBP13.75□□□□□ -0.21
CDK7-208ENST00000512687 LMBR1Q8WVP7 490 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 CDHR1Q96JP9 859 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 SLC9A7Q96T83 725 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 EHMT1Q9H9B1 1298 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 NCOA5Q9HCD5 579 aaKnown RBP13.75□□□□□ -0.21
CDK7-208ENST00000512687 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 PPP4R2Q9NY27 417 aa13.75□□□□□ -0.21
CDK7-208ENST00000512687 PRRC2BQ5JSZ5 2229 aaKnown RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 PRPF3O43395 683 aaKnown RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 BAIAP3O94812 1187 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 CA3P07451 260 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 MARK3P27448 753 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 PSMA5P28066 241 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 PDIA3P30101 505 aaKnown RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 THPOP40225 353 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 EVCP57679 992 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 CCT2P78371 535 aaKnown RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 ITGB3BPQ13352 177 aaPredicted RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 AP3B2Q13367 1082 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 JAKMIP3Q5VZ66 844 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 PPP2R2DQ66LE6 453 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 SPRED2Q7Z698 418 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 HERC6Q8IVU3 1022 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.74□□□□□ -0.21
CDK7-208ENST00000512687 PCYT2Q99447 389 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 SLC28A3Q9HAS3 691 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 KCNH7Q9NS40 1196 aa13.74□□□□□ -0.21
CDK7-208ENST00000512687 ZNF215Q9UL58 517 aaPredicted RBP13.74□□□□□ -0.21
CDK7-208ENST00000512687 SPTBN5Q9NRC6 3674 aaKnown RBP13.73□□□□□ -0.21
CDK7-208ENST00000512687 NFASCO94856 1347 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 EMSYQ7Z589 1322 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 CCDC196A0A1B0GTZ2 297 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 ESYT2A0FGR8 921 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 EPOPA6NHQ4 379 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 PARNO95453 639 aaKnown RBP13.73□□□□□ -0.21
CDK7-208ENST00000512687 FOSP01100 380 aaPredicted RBP13.73□□□□□ -0.21
CDK7-208ENST00000512687 CTSHP09668 335 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 RUFY4Q6ZNE9 571 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 SPRYD3Q8NCJ5 442 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 RASGRP4Q8TDF6 673 aa13.73□□□□□ -0.21
CDK7-208ENST00000512687 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms