RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TTLL13PA6NNM8 815 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 SGK1O00141 431 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 MED21Q13503 144 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ADCK5Q3MIX3 580 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 KRBA2Q6ZNG9 492 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 OR6J1Q8NGC5 347 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 CNPPD1Q9BV87 410 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 TRPV6Q9H1D0 765 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 Q9H521 79 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.61□□□□□ -0.87
VCAN-208ENST00000512590 PRPSAP2O60256 369 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 GRIK1P39086 918 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ALDH1A3P47895 512 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 SYTL1Q8IYJ3 562 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 HSPH1Q92598 858 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 EPC1Q9H2F5 836 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ZHX2Q9Y6X8 837 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 A0A1B0GUL7 405 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 AGRPO00253 132 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 SPTLC1O15269 473 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 MOCS2O96007 188 aaPredicted RBP9.61□□□□□ -0.87
VCAN-208ENST00000512590 HSPD1P10809 573 aaKnown RBP9.61□□□□□ -0.87
VCAN-208ENST00000512590 XRCC5P13010 732 aaKnown RBP9.61□□□□□ -0.87
VCAN-208ENST00000512590 SLC9A1P19634 815 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 PHKA2P46019 1235 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 PLCL1Q15111 1095 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ANKRD20A4Q4UJ75 823 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ANKRD20A8PQ5CZ79 823 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ANKRD20A2Q5SQ80 823 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ANKRD20A1Q5TYW2 823 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 LRCH2Q5VUJ6 765 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 GAS2L3Q86XJ1 694 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 KATNAL1Q9BW62 490 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 GCOM2Q9BZD3 368 aaPredicted RBP9.61□□□□□ -0.87
VCAN-208ENST00000512590 POLR3EQ9NVU0 708 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 SUN2Q9UH99 717 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 H0YC42 278 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 PRR29P0C7W0 189 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 MFAP3P55082 362 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 CYP27A1Q02318 531 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 CACNB2Q08289 660 aaPredicted RBP9.61□□□□□ -0.87
VCAN-208ENST00000512590 STARD3Q14849 445 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 TSNAXIP1Q2TAA8 658 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
VCAN-208ENST00000512590 C11orf96Q7Z7L8 435 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ASAP3Q8TDY4 903 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 IDI2Q9BXS1 227 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 MAGEB5Q9BZ81 275 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 BICC1Q9H694 974 aaKnown RBP9.61□□□□□ -0.87
VCAN-208ENST00000512590 DDX56Q9NY93 547 aaKnown RBP9.61□□□□□ -0.87
VCAN-208ENST00000512590 ARHGAP6O43182 974 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 USP17L8P0C7I0 530 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 STAT1P42224 750 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 TRPC1P48995 793 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 SCARA5Q6ZMJ2 495 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 KRT77Q7Z794 578 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 KCTD6Q8NC69 237 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 PLBD2Q8NHP8 589 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 PPWD1Q96BP3 646 aaKnown RBP9.61□□□□□ -0.87
VCAN-208ENST00000512590 EPS15L1Q9UBC2 864 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ZNF148Q9UQR1 794 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 ABCC11Q96J66 1382 aa9.61□□□□□ -0.87
VCAN-208ENST00000512590 C5orf58C9J3I9 102 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 CCDC159P0C7I6 412 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 ATP6V1C1P21283 382 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 CTDSPL2Q05D32 466 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 TMED2Q15363 201 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 KIF19Q2TAC6 998 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 ITPRIPL1Q6GPH6 555 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 INTS4Q96HW7 963 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 LSM14BQ9BX40 385 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 NDOR1Q9UHB4 597 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 RSPH14Q9UHP6 348 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 SCOCQ9UIL1 159 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 PA2G4Q9UQ80 394 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 EIF4G3O43432 1585 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 TROQ12816 1431 aaPredicted RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 C6orf222P0C671 652 aaPredicted RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 VCLP18206 1134 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 CYP2B6P20813 491 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 ABCB4P21439 1286 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 SYT1P21579 422 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 PPP3CCP48454 512 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 TSHZ3Q63HK5 1081 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 TIGD7Q6NT04 549 aaPredicted RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 C8orf74Q6P047 294 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 DNAJC25Q9H1X3 360 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 KIF17Q9P2E2 1029 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 MAPK8IP1Q9UQF2 711 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 E9PMD0 336 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 EGFRP00533 1210 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 LSP1P33241 339 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 NR5A1Q13285 461 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 RBBP7Q16576 425 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 ATG16L1Q676U5 607 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 DARS2Q6PI48 645 aaKnown RBP9.6□□□□□ -0.87
VCAN-208ENST00000512590 MTBPQ96DY7 904 aa9.6□□□□□ -0.87
VCAN-208ENST00000512590 NAF1Q96HR8 494 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms