RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 USP17L10C9JJH3 530 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 DLL1O00548 723 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 DYNC1I1O14576 645 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 NMT2O60551 498 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 SLURP2P0DP57 97 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 COL6A1P12109 1028 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 UBA7P41226 1012 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 KCNJ6P48051 423 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 FANCCQ00597 558 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
MSH3-203ENST00000512531 NONOQ15233 471 aaKnown RBP eCLIP10.65□□□□□ -0.7
MSH3-203ENST00000512531 ZNF174Q15697 407 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 CCDC84Q86UT8 332 aaPredicted RBP10.65□□□□□ -0.7
MSH3-203ENST00000512531 TEX2Q8IWB9 1127 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 LRRC8AQ8IWT6 810 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 TRIB2Q92519 343 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 USP6NLQ92738 828 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 DHX58Q96C10 678 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 THAP11Q96EK4 314 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.65□□□□□ -0.7
MSH3-203ENST00000512531 SERTAD1Q9UHV2 236 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 MAD2L2Q9UI95 211 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 PCDHA5Q9Y5H7 936 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 LAMA3Q16787 3333 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 ATAD5Q96QE3 1844 aa10.65□□□□□ -0.71
MSH3-203ENST00000512531 PLXNB2O15031 1838 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 FAM196BA6NMK8 535 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 MCM7P33993 719 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 STAT6P42226 847 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 HERVK_113P62684 666 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 MORC3Q14149 939 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 ELOAQ14241 798 aaKnown RBP10.64□□□□□ -0.71
MSH3-203ENST00000512531 KMT5BQ4FZB7 885 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 FILIP1Q7Z7B0 1213 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 C7orf61Q8IZ16 206 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 TDHQ8IZJ6 230 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 TNFRSF25Q93038 417 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 CALML4Q96GE6 196 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 LRCH3Q96II8 777 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 P2RX7Q99572 595 aaKnown RBP10.64□□□□□ -0.71
MSH3-203ENST00000512531 ZMYND12Q9H0C1 365 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 IL17RBQ9NRM6 502 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 IFNKQ9P0W0 207 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 FKBPLQ9UIM3 349 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 MAN1B1Q9UKM7 699 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 GNEQ9Y223 722 aaKnown RBP10.64□□□□□ -0.71
MSH3-203ENST00000512531 STXBP5LQ9Y2K9 1186 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 MYH8P13535 1937 aa10.64□□□□□ -0.71
MSH3-203ENST00000512531 FOCADQ5VW36 1801 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 SMCO2A6NFE2 343 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 ZSCAN12O43309 604 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 SLC26A4O43511 780 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 SKILP12757 684 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 RGS2P41220 211 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 MRPL12P52815 198 aaKnown RBP10.63□□□□□ -0.71
MSH3-203ENST00000512531 ERVK-9P63128 1117 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 ERVK-24P63145 666 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 RRAGBQ5VZM2 374 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 TMC6Q7Z403 805 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 NEK8Q86SG6 692 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 REXO1Q8N1G1 1221 aaKnown RBP10.63□□□□□ -0.71
MSH3-203ENST00000512531 DEPDC4Q8N2C3 294 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 PDILTQ8N807 584 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 CDK5RAP3Q96JB5 506 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 C12orf42Q96LP6 360 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 ZNF830Q96NB3 372 aaPredicted RBP10.63□□□□□ -0.71
MSH3-203ENST00000512531 XPO4Q9C0E2 1151 aaKnown RBP10.63□□□□□ -0.71
MSH3-203ENST00000512531 MTMR4Q9NYA4 1195 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 RBPJLQ9UBG7 517 aa10.63□□□□□ -0.71
MSH3-203ENST00000512531 PFASO15067 1338 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 DDX60LQ5H9U9 1706 aaKnown RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 UQCRHLA0A096LP55 91 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 POTEB3A0JP26 581 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 STXBP3O00186 592 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 MPHOSPH10O00566 681 aaKnown RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 AP5Z1O43299 807 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 MARCH6O60337 910 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 MSCO60682 206 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 UQCRHP07919 91 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 OR52Z1P0C646 297 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 CYP2B6P20813 491 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 MAGEA10P43363 369 aaPredicted RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 NOVP48745 357 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 SARSP49591 514 aaKnown RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 ADCY7P51828 1080 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 CCNA1P78396 465 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 CACNB2Q08289 660 aaPredicted RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 TRIM32Q13049 653 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 CRTC2Q53ET0 693 aaPredicted RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 SPATA1Q5VX52 437 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 LHX8Q68G74 356 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 WWC2Q6AWC2 1192 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 FAM109BQ6ICB4 259 aaPredicted RBP10.62□□□□□ -0.71
MSH3-203ENST00000512531 POTEBQ6S5H4 581 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 LBX2Q6XYB7 198 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 PLEKHH3Q7Z736 793 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 FCHSD1Q86WN1 690 aa10.62□□□□□ -0.71
MSH3-203ENST00000512531 DEFB123Q8N688 67 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms