RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 HAUS3Q68CZ6 603 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 LRSAM1Q6UWE0 723 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 SEPT14Q6ZU15 432 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 CKAP2LQ8IYA6 745 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 RDM1Q8NG50 284 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 ERMNQ8TAM6 284 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 NEK9Q8TD19 979 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 SOCS4Q8WXH5 440 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 PLIN2Q99541 437 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 TINF2Q9BSI4 451 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 ARHGAP39Q9C0H5 1083 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 MAGEF1Q9HAY2 307 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 TUFT1Q9NNX1 390 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 VTA1Q9NP79 307 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 SLC5A4Q9NY91 659 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 PKD2L1Q9P0L9 805 aa11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 DDX41Q9UJV9 622 aaKnown RBP11.2□□□□□ -0.62
PDGFRA-209ENST00000512143 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 TNPO2O14787 897 aaKnown RBP11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 LYPLA2O95372 231 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 UBA1P22314 1058 aaKnown RBP11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 SFNP31947 248 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 JAK3P52333 1124 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 FCGRTP55899 365 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 SP3Q02447 781 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 DPYDQ12882 1025 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 PNOCQ13519 176 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 OLFML2BQ68BL8 750 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 EEPD1Q7L9B9 569 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 GAS2L3Q86XJ1 694 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 SMAP1Q8IYB5 467 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 GRAMD1CQ8IYS0 662 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 CEP57L1Q8IYX8 460 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 GIMAP8Q8ND71 665 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 RAD54LQ92698 747 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 ERCC4Q92889 916 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 DYDC2Q96IM9 177 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 TRIM47Q96LD4 638 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 JPH1Q9HDC5 661 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 PDGFCQ9NRA1 345 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 RGL1Q9NZL6 768 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 FLRT1Q9NZU1 646 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 WRAP73Q9P2S5 460 aaPredicted RBP11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 SLC9A2Q9UBY0 812 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 KIAA1024Q9UPX6 916 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 TELO2Q9Y4R8 837 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 PCDHA5Q9Y5H7 936 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 WDR81Q562E7 1941 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 DOCK5Q9H7D0 1870 aa11.19□□□□□ -0.62
PDGFRA-209ENST00000512143 IGKV6D-21A0A0A0MT36 114 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 WDR64B1ANS9 1081 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 CHMP2AO43633 222 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 TRPA1O75762 1119 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 FARP2O94887 1054 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 MYL1P05976 194 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 P4HBP07237 508 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 XRCC5P13010 732 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 RGS2P41220 211 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 PSMC4P43686 418 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 ACTR2P61160 394 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 PSMC6P62333 389 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 NEDD9Q14511 834 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 ZRSR1Q15695 479 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 METTL7BQ6UX53 244 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 ABHD15Q6UXT9 468 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 MIER3Q7Z3K6 550 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 FBXO16Q8IX29 292 aaPredicted RBP11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 C7orf25Q9BPX7 421 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 ABHD16BQ9H3Z7 469 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 HOOK1Q9UJC3 728 aaKnown RBP11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 PCDHA10Q9Y5I2 948 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 ZSWIM8A7E2V4 1837 aa11.18□□□□□ -0.62
PDGFRA-209ENST00000512143 GSTTP1A0A1W2PQM5 241 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 E9PMD0 336 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 STBD1O95210 358 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 HSPA6P17066 643 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 CASP1P29466 404 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 AFMP43652 599 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 CYP4A11Q02928 519 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 CUL4BQ13620 913 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 ACVR2BQ13705 512 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 CTTNQ14247 550 aaKnown RBP11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 MCM6Q14566 821 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 TTLL4Q14679 1199 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 LY6KQ17RY6 165 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 CELF3Q5SZQ8 465 aaKnown RBP11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 TMEM63BQ5T3F8 832 aa11.17□□□□□ -0.62
PDGFRA-209ENST00000512143 CYFIP1Q7L576 1253 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms