RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 GBF1Q92538 1859 aa22.13■■□□□ 1.13
SMAD1-211ENST00000512019 NKRFO15226 690 aaKnown RBP eCLIP22.12■■□□□ 1.13
SMAD1-211ENST00000512019 SLC37A4O43826 429 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 BMP15O95972 392 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 TIMP1P01033 207 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 TXNP10599 105 aaKnown RBP22.12■■□□□ 1.13
SMAD1-211ENST00000512019 TNFAIP2Q03169 654 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 NBR1Q14596 966 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 ZNF174Q15697 407 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 GIMAP8Q8ND71 665 aaPredicted RBP22.12■■□□□ 1.13
SMAD1-211ENST00000512019 VTI1AQ96AJ9 217 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 SPC25Q9HBM1 224 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 MYH15Q9Y2K3 1946 aa22.12■■□□□ 1.13
SMAD1-211ENST00000512019 WNT7AO00755 349 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 TBX3O15119 743 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 ARP10275 920 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 SEMA3FQ13275 785 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 NEDD9Q14511 834 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 DUSP28Q4G0W2 176 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 CCDC62Q6P9F0 684 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 POTEDQ86YR6 584 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 SENP7Q9BQF6 1050 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 ZNF577Q9BSK1 485 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 COL25A1Q9BXS0 654 aaPredicted RBP22.11■■□□□ 1.13
SMAD1-211ENST00000512019 AGO4Q9HCK5 861 aaKnown RBP22.11■■□□□ 1.13
SMAD1-211ENST00000512019 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.11■■□□□ 1.13
SMAD1-211ENST00000512019 DDX41Q9UJV9 622 aaKnown RBP22.11■■□□□ 1.13
SMAD1-211ENST00000512019 CEP131Q9UPN4 1083 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 PCDHB6Q9Y5E3 794 aa22.11■■□□□ 1.13
SMAD1-211ENST00000512019 CDH23Q9H251 3354 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 A0A0U1RQG5 324 aaPredicted RBP22.1■■□□□ 1.13
SMAD1-211ENST00000512019 ARVCFO00192 962 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 IPO5O00410 1097 aaKnown RBP22.1■■□□□ 1.13
SMAD1-211ENST00000512019 MSH4O15457 936 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 MARCH6O60337 910 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 ARIH2O95376 493 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 BAG4O95429 457 aaKnown RBP22.1■■□□□ 1.13
SMAD1-211ENST00000512019 UBA1P22314 1058 aaKnown RBP22.1■■□□□ 1.13
SMAD1-211ENST00000512019 CALCRLQ16602 461 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 TMEM63BQ5T3F8 832 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 ATL3Q6DD88 541 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 FAM173BQ6P4H8 233 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 C16orf59Q7L2K0 433 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 FAM20AQ96MK3 541 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMAD1-211ENST00000512019 SDF4Q9BRK5 362 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 KCNMB3Q9NPA1 279 aa22.1■■□□□ 1.13
SMAD1-211ENST00000512019 MROH7Q68CQ1 1323 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 LAD1O00515 517 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 KCNA2P16389 499 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 SMPD1P17405 629 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 NKX3-2P78367 333 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 LY6KQ17RY6 165 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 MFSD5Q6N075 450 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 FAM126BQ8IXS8 530 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 SLFN12Q8IYM2 578 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 MAFAQ8NHW3 353 aaPredicted RBP22.09■■□□□ 1.13
SMAD1-211ENST00000512019 ETNPPLQ8TBG4 499 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 PPP1R12CQ9BZL4 782 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 TBC1D22BQ9NU19 505 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 PKD2L1Q9P0L9 805 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 TCEAL9Q9UHQ7 104 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 GNEQ9Y223 722 aaKnown RBP22.09■■□□□ 1.13
SMAD1-211ENST00000512019 CUL9Q8IWT3 2517 aa22.09■■□□□ 1.13
SMAD1-211ENST00000512019 NFASCO94856 1347 aa22.08■■□□□ 1.13
SMAD1-211ENST00000512019 GH1P01241 217 aa22.08■■□□□ 1.13
SMAD1-211ENST00000512019 OR52Z1P0C646 297 aa22.08■■□□□ 1.13
SMAD1-211ENST00000512019 FOXD4L6Q3SYB3 417 aaPredicted RBP22.08■■□□□ 1.13
SMAD1-211ENST00000512019 CXCL17Q6UXB2 119 aa22.08■■□□□ 1.13
SMAD1-211ENST00000512019 FOXD4L3Q6VB84 417 aaPredicted RBP22.08■■□□□ 1.13
SMAD1-211ENST00000512019 SLC5A5Q92911 643 aa22.08■■□□□ 1.13
SMAD1-211ENST00000512019 RIT2Q99578 217 aa22.08■■□□□ 1.13
SMAD1-211ENST00000512019 Q9Y3F1 56 aa22.08■■□□□ 1.13
SMAD1-211ENST00000512019 GAS7O60861 476 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 GGPS1O95749 300 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 CSF2RAP15509 400 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 SP2Q02086 613 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 PTGDRQ13258 359 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 ITGB3BPQ13352 177 aaPredicted RBP22.07■■□□□ 1.12
SMAD1-211ENST00000512019 SF3A1Q15459 793 aaKnown RBP22.07■■□□□ 1.12
SMAD1-211ENST00000512019 LRCH2Q5VUJ6 765 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 METTL7BQ6UX53 244 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 TLK2Q86UE8 772 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 DHX37Q8IY37 1157 aaKnown RBP22.07■■□□□ 1.12
SMAD1-211ENST00000512019 USP28Q96RU2 1077 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 MLXIPQ9HAP2 919 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 POLR3EQ9NVU0 708 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 CFAP45Q9UL16 551 aa22.07■■□□□ 1.12
SMAD1-211ENST00000512019 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.06■■□□□ 1.12
SMAD1-211ENST00000512019 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.06■■□□□ 1.12
SMAD1-211ENST00000512019 ATP9AO75110 1047 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 CD4P01730 458 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 ACRP10323 421 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 DNAJB2P25686 324 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 ATP2C1P98194 919 aaPredicted RBP22.06■■□□□ 1.12
SMAD1-211ENST00000512019 DNM1Q05193 864 aaKnown RBP22.06■■□□□ 1.12
SMAD1-211ENST00000512019 LAMC2Q13753 1193 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 TMEM240Q5SV17 173 aa22.06■■□□□ 1.12
SMAD1-211ENST00000512019 CELF3Q5SZQ8 465 aaKnown RBP22.06■■□□□ 1.12
SMAD1-211ENST00000512019 EMID1Q96A84 441 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms