RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 ARRDC4Q8NCT1 418 aa11.75□□□□□ -0.53
HOXA4-203ENST00000511914 MTMR9Q96QG7 549 aa11.75□□□□□ -0.53
HOXA4-203ENST00000511914 ANO3Q9BYT9 981 aa11.75□□□□□ -0.53
HOXA4-203ENST00000511914 RAB34Q9BZG1 259 aa11.75□□□□□ -0.53
HOXA4-203ENST00000511914 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
HOXA4-203ENST00000511914 GRPEL1Q9HAV7 217 aa11.75□□□□□ -0.53
HOXA4-203ENST00000511914 FBXO28Q9NVF7 368 aa11.75□□□□□ -0.53
HOXA4-203ENST00000511914 TMEM260Q9NX78 707 aa11.75□□□□□ -0.53
HOXA4-203ENST00000511914 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
HOXA4-203ENST00000511914 VWA3AA6NCI4 1184 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 VWA5AO00534 786 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 TBX3O15119 743 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 SEPT4O43236 478 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 SLFN14P0C7P3 912 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 DEKP35659 375 aaKnown RBP11.74□□□□□ -0.53
HOXA4-203ENST00000511914 HSD17B4P51659 736 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 ARHGAP4P98171 946 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 CAMK4Q16566 473 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 USH1GQ495M9 461 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 OLFML2BQ68BL8 750 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 USP17L6PQ6QN14 398 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 KRBA2Q6ZNG9 492 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 MB21D1Q8N884 522 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 IQUBQ8NA54 791 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 ATG4CQ96DT6 458 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 CDX2Q99626 313 aaPredicted RBP11.74□□□□□ -0.53
HOXA4-203ENST00000511914 KIAA1468Q9P260 1216 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 CCPG1Q9ULG6 757 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 ZNF536O15090 1300 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 PRUNE2Q8WUY3 3088 aa11.74□□□□□ -0.53
HOXA4-203ENST00000511914 TRIM43BA6NCK2 446 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 POLR2DO15514 142 aaKnown RBP11.73□□□□□ -0.53
HOXA4-203ENST00000511914 STRNO43815 780 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 EDIL3O43854 480 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 IGHA2P01877 340 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 SNAP25P60880 206 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 TYRO3Q06418 890 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 LRRC41Q15345 812 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 IL17AQ16552 155 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 CALCRLQ16602 461 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 TMEM266Q2M3C6 531 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 Q4G0T1 1027 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 CCDC174Q6PII3 467 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 SLFN12Q8IYM2 578 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 IGSF22Q8N9C0 903 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 MAFAQ8NHW3 353 aaPredicted RBP11.73□□□□□ -0.53
HOXA4-203ENST00000511914 MYLIPQ8WY64 445 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 SYMPKQ92797 1274 aaKnown RBP11.73□□□□□ -0.53
HOXA4-203ENST00000511914 TRIM43Q96BQ3 446 aaPredicted RBP11.73□□□□□ -0.53
HOXA4-203ENST00000511914 MAML3Q96JK9 1138 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 FAM20AQ96MK3 541 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 TMEM60Q9H2L4 133 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 SEMA6BQ9H3T3 888 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 CUEDC2Q9H467 287 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 MAGEF1Q9HAY2 307 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 PDLIM7Q9NR12 457 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 ANO10Q9NW15 660 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 STK24Q9Y6E0 443 aa11.73□□□□□ -0.53
HOXA4-203ENST00000511914 MYL1P05976 194 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 PGK2P07205 417 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 GRIN1Q05586 938 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 ZRSR1Q15695 479 aaKnown RBP11.72□□□□□ -0.53
HOXA4-203ENST00000511914 LONRF3Q496Y0 759 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 CKAP2LQ8IYA6 745 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 CEP57L1Q8IYX8 460 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 SHCBP1Q8NEM2 672 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 CLEC4DQ8WXI8 215 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 EPSTI1Q96J88 318 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 DDX25Q9UHL0 483 aaKnown RBP11.72□□□□□ -0.53
HOXA4-203ENST00000511914 TUBE1Q9UJT0 475 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 MRVI1Q9Y6F6 885 aa11.72□□□□□ -0.53
HOXA4-203ENST00000511914 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
HOXA4-203ENST00000511914 PGK1P00558 417 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 CFBP00751 764 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 FCER1AP12319 257 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 ITGB8P26012 769 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 UBA7P41226 1012 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 TLE2Q04725 743 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 TMEM132BQ14DG7 1078 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 SNX17Q15036 470 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 STX1AQ16623 288 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 SPECC1Q5M775 1068 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
HOXA4-203ENST00000511914 NT5DC1Q5TFE4 455 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 XRRA1Q6P2D8 792 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 NIPA1Q7RTP0 329 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 KCTD17Q8N5Z5 321 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 REPS2Q8NFH8 660 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 LENG1Q96BZ8 264 aaPredicted RBP11.71□□□□□ -0.53
HOXA4-203ENST00000511914 AGBL1Q96MI9 1066 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 NAT10Q9H0A0 1025 aaKnown RBP11.71□□□□□ -0.53
HOXA4-203ENST00000511914 RBSNQ9H1K0 784 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 TTYH1Q9H313 450 aaPredicted RBP11.71□□□□□ -0.53
HOXA4-203ENST00000511914 MROH8Q9H579 483 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 KCNMB3Q9NPA1 279 aa11.71□□□□□ -0.53
HOXA4-203ENST00000511914 XPNPEP3Q9NQH7 507 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms