RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ADCY4Q8NFM4 1077 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 ZNF669Q96BR6 464 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 PEX11GQ96HA9 241 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 ADAM7Q9H2U9 754 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 CGGBP1Q9UFW8 167 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 JAG2Q9Y219 1238 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 SUGT1Q9Y2Z0 365 aa5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 INO80Q9ULG1 1556 aaPredicted RBP5.29□□□□□ -1.56
TOPBP1-208ENST00000511439 RGPD1P0DJD0 1748 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 AURKAO14965 403 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 ATF2P15336 505 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 HTRA3P83110 453 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 GRB10Q13322 594 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 BMS1Q14692 1282 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 VWA3BQ502W6 1294 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 B3GNT8Q7Z7M8 397 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 MRGPRX3Q96LB0 322 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 BDH2Q9BUT1 245 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 AKT3Q9Y243 479 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 EMC9Q9Y3B6 208 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 BACE2Q9Y5Z0 518 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 TNS2Q63HR2 1409 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 ADGRB2O60241 1585 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 SHANK3Q9BYB0 1731 aa5.28□□□□□ -1.56
TOPBP1-208ENST00000511439 ARHGAP35Q9NRY4 1499 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 PREX2Q70Z35 1606 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 PLA2G1BP04054 148 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 ITGAVP06756 1048 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 ASGR2P07307 311 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 CLIP1P30622 1438 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 AMPD2Q01433 879 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 EFEMP1Q12805 493 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 MTERF2Q49AM1 385 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 UBXN11Q5T124 520 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 POMZP3Q6PJE2 187 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 SPATC1Q76KD6 591 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 KRT27Q7Z3Y8 459 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 CPA5Q8WXQ8 436 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 SGSM3Q96HU1 749 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 LGR4Q9BXB1 951 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 PIF1Q9H611 641 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 PCDH18Q9HCL0 1135 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 HCFC2Q9Y5Z7 792 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 PARD3Q8TEW0 1356 aa5.27□□□□□ -1.57
TOPBP1-208ENST00000511439 WASHC2CQ9Y4E1 1318 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 GLI3P10071 1580 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 NRKQ7Z2Y5 1582 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 BRWD3Q6RI45 1802 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 A0A1W2PQU0 124 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 IQCA1LA6NCM1 817 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 C2orf71A6NGG8 1288 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 AGRPO00253 132 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 NOP56O00567 594 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 CAPNS1P04632 268 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 PAMP19021 973 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 IFRD2Q12894 506 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 RTP5Q14D33 572 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 NT5DC1Q5TFE4 455 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 ZNF227Q86WZ6 799 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 TRIM59Q8IWR1 403 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 CRACR2BQ8N4Y2 399 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 USP33Q8TEY7 942 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 PPP1R14AQ96A00 147 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 MRFAP1L1Q96HT8 127 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 DNAJC7Q99615 494 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 NTMQ9P121 344 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 LRP2BPQ9P2M1 347 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 PALD1Q9ULE6 856 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 DLC1Q96QB1 1528 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 ERVK-7P63135 1459 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 CDC42BPBQ9Y5S2 1711 aa5.26□□□□□ -1.57
TOPBP1-208ENST00000511439 SYCP2Q9BX26 1530 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 NPHP3-ACAD11A0A0J9YXS1 232 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 K7ESM1 405 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 STXBP3O00186 592 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 TBX1O43435 398 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 DIAPH1O60610 1272 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 VAMP4O75379 141 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 KCNH1O95259 989 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 PMLP29590 882 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 GJA9P57773 515 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 PPP2R2AP63151 447 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 NFKB2Q00653 900 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 NBPF8Q3BBV2 869 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 TTLL7Q6ZT98 887 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 CARFQ8N187 725 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 LRRC47Q8N1G4 583 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 JMYQ8N9B5 988 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 SPATA25Q9BR10 227 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 MCMBPQ9BTE3 642 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 RWDD3Q9Y3V2 267 aa5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-208ENST00000511439 DCCP43146 1447 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 TROQ12816 1431 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 ADCY3O60266 1144 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 NPHS1O60500 1241 aa5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 HNRNPMP52272 730 aaKnown RBP eCLIP5.24□□□□□ -1.57
TOPBP1-208ENST00000511439 CACNB2Q08289 660 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms