RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 DHTKD1Q96HY7 919 aaPredicted RBP16.97■□□□□ 0.31
SCLT1-209ENST00000511426 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
SCLT1-209ENST00000511426 SYNRGQ9UMZ2 1314 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 POTEFA5A3E0 1075 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 MANSC4A6NHS7 340 aaPredicted RBP16.96■□□□□ 0.31
SCLT1-209ENST00000511426 GOLGA6L6A8MZA4 724 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 WDR64B1ANS9 1081 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 EML1O00423 815 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 SLITRK3O94933 977 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 KIF20AO95235 890 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 FCER1AP12319 257 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 HUNKP57058 714 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 INHBEP58166 350 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 EHHADHQ08426 723 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 ITGB3BPQ13352 177 aaPredicted RBP16.96■□□□□ 0.31
SCLT1-209ENST00000511426 KCNV1Q6PIU1 500 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 POTEGQ6S5H5 508 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 ADSSL1Q8N142 457 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 ZSWIM4Q9H7M6 989 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 TXNRD2Q9NNW7 524 aa16.96■□□□□ 0.31
SCLT1-209ENST00000511426 DNAJC25-GNG10A0A024R161 153 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 BICDL2A1A5D9 508 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 FRMD3A2A2Y4 597 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 SPATA31C2B4DYI2 1134 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 CBFA2T2O43439 604 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 TPM3P06753 285 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 TGFB3P10600 412 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 CYP11B2P19099 503 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 NFE2L3Q9Y4A8 694 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 LOXHD1Q8IVV2 1947 aa16.95■□□□□ 0.3
SCLT1-209ENST00000511426 E9PMD0 336 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 STRNO43815 780 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 ZNF75DP51815 510 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 SPAG1Q07617 926 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 DHX8Q14562 1220 aaKnown RBP16.94■□□□□ 0.3
SCLT1-209ENST00000511426 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 NOC3LQ8WTT2 800 aaKnown RBP16.94■□□□□ 0.3
SCLT1-209ENST00000511426 DNAJC19Q96DA6 116 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 DYDC2Q96IM9 177 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 MMP19Q99542 508 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 SRCAPQ6ZRS2 3230 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 PASKQ96RG2 1323 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 CHMP2AO43633 222 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 KCNA2P16389 499 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 ZNF18P17022 549 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 QARSP47897 775 aaKnown RBP16.94■□□□□ 0.3
SCLT1-209ENST00000511426 FAM110CQ1W6H9 321 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 C4orf19Q8IY42 314 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 GUF1Q8N442 669 aaKnown RBP16.94■□□□□ 0.3
SCLT1-209ENST00000511426 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 HHIPL1Q96JK4 782 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 LXNQ9BS40 222 aa16.94■□□□□ 0.3
SCLT1-209ENST00000511426 DBR1Q9UK59 544 aaKnown RBP16.94■□□□□ 0.3
SCLT1-209ENST00000511426 AP5Z1O43299 807 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
SCLT1-209ENST00000511426 PRCPP42785 496 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 CTAGE1Q96RT6 745 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 TIPINQ9BVW5 301 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 HSD3B7Q9H2F3 369 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 RGL1Q9NZL6 768 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 ODF2LQ9ULJ1 636 aa16.93■□□□□ 0.3
SCLT1-209ENST00000511426 ASB14A6NK59 587 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 RGS20O76081 388 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCLT1-209ENST00000511426 GAP43P17677 238 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 PSMC5P62195 406 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 Q3C1V9 767 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 SAPCD2Q86UD0 394 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 TPH2Q8IWU9 490 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 NELFBQ8WX92 580 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 PURBQ96QR8 312 aaKnown RBP16.92■□□□□ 0.3
SCLT1-209ENST00000511426 JPH1Q9HDC5 661 aaPredicted RBP16.92■□□□□ 0.3
SCLT1-209ENST00000511426 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 SEL1LQ9UBV2 794 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 GDAQ9Y2T3 454 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 PCDHA10Q9Y5I2 948 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 LCTP09848 1927 aa16.92■□□□□ 0.3
SCLT1-209ENST00000511426 SOWAHBA6NEL2 793 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 KRT18P05783 430 aaKnown RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 CYP2C8P10632 490 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 IDEP14735 1019 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 CCNE1P24864 410 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 CNTN2Q02246 1040 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 COASYQ13057 564 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 NEDD9Q14511 834 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 TPD52L1Q16890 204 aaPredicted RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 FAM26FQ5R3K3 315 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 KLHL10Q6JEL2 608 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 DYMQ7RTS9 669 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ZNF467Q7Z7K2 595 aaPredicted RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ANKRD20A12PQ8NF67 263 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ZNF526Q8TF50 670 aaPredicted RBP16.91■□□□□ 0.3
SCLT1-209ENST00000511426 ATP6V0A1Q93050 837 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 BHMT2Q9H2M3 363 aa16.91■□□□□ 0.3
SCLT1-209ENST00000511426 FANCLQ9NW38 375 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms