RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 CCL5P13501 91 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 SMPD1P17405 629 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 SREBF1P36956 1147 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 SOX10P56693 466 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 SP2Q02086 613 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ZRSR1Q15695 479 aaKnown RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 STXBP2Q15833 593 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 TTC38Q5R3I4 469 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 BLOC1S3Q6QNY0 202 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 NEK8Q86SG6 692 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 VSIG10LQ86VR7 867 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 NOSTRINQ8IVI9 506 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 ZNF713Q8N859 430 aaPredicted RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 DAGLBQ8NCG7 672 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 RGS22Q8NE09 1264 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 KATNBL1Q9H079 304 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 RNF208Q9H0X6 261 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 TMEM60Q9H2L4 133 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 EHMT1Q9H9B1 1298 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 SLC5A4Q9NY91 659 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 DDX25Q9UHL0 483 aaKnown RBP6.14□□□□□ -1.43
PROM1-211ENST00000511153 PNMA2Q9UL42 364 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 KIF3AQ9Y496 699 aa6.14□□□□□ -1.43
PROM1-211ENST00000511153 TCHHQ07283 1943 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 CCDC85CA6NKD9 419 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 EIF3JO75822 258 aaKnown RBP6.13□□□□□ -1.43
PROM1-211ENST00000511153 F13A1P00488 732 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 HOXC6P09630 235 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 TXNP10599 105 aaKnown RBP6.13□□□□□ -1.43
PROM1-211ENST00000511153 CYBAP13498 195 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 PDCP20941 246 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 MARCKSP29966 332 aaPredicted RBP6.13□□□□□ -1.43
PROM1-211ENST00000511153 TXKP42681 527 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 COPS2P61201 443 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 TNFAIP2Q03169 654 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 DNM1Q05193 864 aaKnown RBP6.13□□□□□ -1.43
PROM1-211ENST00000511153 AP3B2Q13367 1082 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 MTMR1Q13613 665 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 KMT5BQ4FZB7 885 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 SPECC1Q5M775 1068 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 UTP14CQ5TAP6 766 aaKnown RBP6.13□□□□□ -1.43
PROM1-211ENST00000511153 PCNX4Q63HM2 1172 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 TAPT1Q6NXT6 567 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 FBXO46Q6PJ61 603 aaPredicted RBP6.13□□□□□ -1.43
PROM1-211ENST00000511153 CYFIP1Q7L576 1253 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 DNERQ8NFT8 737 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 OR6J1Q8NGC5 347 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 FERMT2Q96AC1 680 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 DEFB118Q96PH6 123 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 PLIN2Q99541 437 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 MXRA8Q9BRK3 442 aa6.13□□□□□ -1.43
PROM1-211ENST00000511153 FOXP1Q9H334 677 aaPredicted RBP6.13□□□□□ -1.43
PROM1-211ENST00000511153 KIAA0100Q14667 2235 aaKnown RBP6.13□□□□□ -1.43
PROM1-211ENST00000511153 MKI67P46013 3256 aaKnown RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 MYH15Q9Y2K3 1946 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 DNAH12Q6ZR08 3092 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 PP2D1A8MPX8 630 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 MSH4O15457 936 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 FIBPO43427 364 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 NEMFO60524 1076 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 LILRB3O75022 631 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 GGPS1O95749 300 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 FOSP01100 380 aaPredicted RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 C6orf222P0C671 652 aaPredicted RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 ZNF286BP0CG31 522 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 XRCC5P13010 732 aaKnown RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 EN2P19622 333 aaPredicted RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 UBA1P22314 1058 aaKnown RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 EDNRBP24530 442 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 MARK3P27448 753 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 CDC25AP30304 524 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 GRIN1Q05586 938 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 ITGB3BPQ13352 177 aaPredicted RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 IRF5Q13568 498 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 CALCRLQ16602 461 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 CEP55Q53EZ4 464 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 NCAPH2Q6IBW4 605 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 GALNT17Q6IS24 598 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 MAMDC4Q6UXC1 1216 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 RNF19BQ6ZMZ0 732 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 TRIM50Q86XT4 487 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 DIS3LQ8TF46 1054 aaKnown RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 AFG1LQ8WV93 481 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 ZBTB10Q96DT7 871 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 CLIC6Q96NY7 704 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 USP28Q96RU2 1077 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 IWS1Q96ST2 819 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 ZNF577Q9BSK1 485 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.12□□□□□ -1.43
PROM1-211ENST00000511153 GLT8D2Q9H1C3 349 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 AGO4Q9HCK5 861 aaKnown RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 HMX1Q9NP08 348 aaPredicted RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 JADE2Q9NQC1 790 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 PRDM10Q9NQV6 1147 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 KCNH7Q9NS40 1196 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 NOL7Q9UMY1 257 aaKnown RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 DIS3Q9Y2L1 958 aaKnown RBP6.12□□□□□ -1.43
PROM1-211ENST00000511153 UBIAD1Q9Y5Z9 338 aa6.12□□□□□ -1.43
PROM1-211ENST00000511153 FRMPD4Q14CM0 1322 aa6.11□□□□□ -1.43
PROM1-211ENST00000511153 SYNGAP1Q96PV0 1343 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms