RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 HIC1Q14526 733 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 AAK1Q2M2I8 961 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 TCTN1Q2MV58 587 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 TRIM71Q2Q1W2 868 aaKnown RBP11.62□□□□□ -0.55
SCARB2-204ENST00000509994 KRT40Q6A162 431 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 DBF4BQ8NFT6 615 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 GPRASP2Q96D09 838 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 RAD9AQ99638 391 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 RNPEPQ9H4A4 650 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 RBM28Q9NW13 759 aaKnown RBP11.62□□□□□ -0.55
SCARB2-204ENST00000509994 MTCH2Q9Y6C9 303 aa11.62□□□□□ -0.55
SCARB2-204ENST00000509994 KLF18A0A0U1RQI7 1052 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 RBAK-RBAKDNI3L0D1 243 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 TNFRSF10AO00220 468 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 GJB5O95377 273 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 ZNF76P36508 570 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 ADCY7P51828 1080 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 IGBP1P78318 339 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 TFF2Q03403 129 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 PPFIA1Q13136 1202 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 GRB10Q13322 594 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 COL9A3Q14050 684 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-204ENST00000509994 KRT32Q14532 448 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 MBTPS1Q14703 1052 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 GPNMBQ14956 572 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 APOA5Q6Q788 366 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCARB2-204ENST00000509994 RSPH3Q86UC2 560 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 LMBR1Q8WVP7 490 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 PGBD1Q96JS3 809 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 TGS1Q96RS0 853 aaKnown RBP11.61□□□□□ -0.55
SCARB2-204ENST00000509994 UHRF1Q96T88 793 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-204ENST00000509994 YME1L1Q96TA2 773 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 SENP7Q9BQF6 1050 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 SDF4Q9BRK5 362 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 AZI2Q9H6S1 392 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 PCDHA6Q9UN73 950 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 PCDHA8Q9Y5H6 950 aa11.61□□□□□ -0.55
SCARB2-204ENST00000509994 CNTNAP5Q8WYK1 1306 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 LOXHD1Q8IVV2 1947 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 CAND2O75155 1236 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 WWC2Q6AWC2 1192 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
SCARB2-204ENST00000509994 SPRED2Q7Z698 418 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 SGMS1Q86VZ5 419 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 SEPT1Q8WYJ6 367 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 CCDC136Q96JN2 1154 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 ERAP1Q9NZ08 941 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 TCEAL9Q9UHQ7 104 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 TUBE1Q9UJT0 475 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 TRPC6Q9Y210 931 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 TELO2Q9Y4R8 837 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 INSL6Q9Y581 213 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 NRCAMQ92823 1304 aa11.6□□□□□ -0.55
SCARB2-204ENST00000509994 TTC28Q96AY4 2481 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 LINC01553A4QN01 128 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 M0QZ92 97 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 ATP9AO75110 1047 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 HMGB1P09429 215 aaKnown RBP11.59□□□□□ -0.55
SCARB2-204ENST00000509994 KCNA2P16389 499 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 ITGB5P18084 799 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 GRIK4Q16099 956 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 PLEKHG4Q58EX7 1191 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 TRAF7Q6Q0C0 670 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 IFIH1Q9BYX4 1025 aaKnown RBP11.59□□□□□ -0.55
SCARB2-204ENST00000509994 SMARCAD1Q9H4L7 1026 aa11.59□□□□□ -0.55
SCARB2-204ENST00000509994 JPH1Q9HDC5 661 aaPredicted RBP11.59□□□□□ -0.55
SCARB2-204ENST00000509994 V9GY48 417 aaPredicted RBP11.59□□□□□ -0.55
SCARB2-204ENST00000509994 MYH9P35579 1960 aaKnown RBP11.58□□□□□ -0.56
SCARB2-204ENST00000509994 SMCO2A6NFE2 343 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 DDX39AO00148 427 aaKnown RBP11.58□□□□□ -0.56
SCARB2-204ENST00000509994 GHRP10912 638 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 IBSPP21815 317 aaPredicted RBP11.58□□□□□ -0.56
SCARB2-204ENST00000509994 METAP2P50579 478 aaKnown RBP eCLIP11.58□□□□□ -0.56
SCARB2-204ENST00000509994 KCNQ1P51787 676 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 AKAP17AQ02040 695 aaKnown RBP11.58□□□□□ -0.56
SCARB2-204ENST00000509994 ADCK5Q3MIX3 580 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 TAF2Q6P1X5 1199 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 RUFY4Q6ZNE9 571 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 EP400NLQ6ZTU2 488 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 APBB2Q92870 758 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 HLA-CQ95604 372 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 JAKMIP1Q96N16 626 aaKnown RBP11.58□□□□□ -0.56
SCARB2-204ENST00000509994 C17orf80Q9BSJ5 609 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 ANO3Q9BYT9 981 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 FAM49AQ9H0Q0 323 aaPredicted RBP11.58□□□□□ -0.56
SCARB2-204ENST00000509994 RIC8AQ9NPQ8 531 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 JADE2Q9NQC1 790 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 SLC9A2Q9UBY0 812 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 BRPF3Q9ULD4 1205 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 UBIAD1Q9Y5Z9 338 aa11.58□□□□□ -0.56
SCARB2-204ENST00000509994 RALGAPA2Q2PPJ7 1873 aa11.57□□□□□ -0.56
SCARB2-204ENST00000509994 CCDC196A0A1B0GTZ2 297 aa11.57□□□□□ -0.56
SCARB2-204ENST00000509994 GSTTP1A0A1W2PQM5 241 aa11.57□□□□□ -0.56
SCARB2-204ENST00000509994 hCG_1984214I3L0E3 225 aa11.57□□□□□ -0.56
SCARB2-204ENST00000509994 STXBP3O00186 592 aa11.57□□□□□ -0.56
SCARB2-204ENST00000509994 BACH1O14867 736 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms