RNA–Protein interactions for RNA: ENST00000509564.1

SDHA-211, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-211ENST00000509564 CYP46A1Q9Y6A2 500 aa13.75□□□□□ -0.21
SDHA-211ENST00000509564 NFASCO94856 1347 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 CAND2O75155 1236 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 CTSHP09668 335 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 ADD1P35611 737 aaKnown RBP13.74□□□□□ -0.21
SDHA-211ENST00000509564 THPOP40225 353 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
SDHA-211ENST00000509564 RABGGTBP53611 331 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 WDR5P61964 334 aaKnown RBP13.74□□□□□ -0.21
SDHA-211ENST00000509564 ARHGAP4P98171 946 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 GRIN2CQ14957 1233 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 TRIM71Q2Q1W2 868 aaKnown RBP13.74□□□□□ -0.21
SDHA-211ENST00000509564 TRIM22Q8IYM9 498 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 PHKBQ93100 1093 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 MXRA8Q9BRK3 442 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 SLC26A6Q9BXS9 759 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 C6orf50Q9HD87 102 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 TMEM260Q9NX78 707 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 ERAP1Q9NZ08 941 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 SLC9A2Q9UBY0 812 aa13.74□□□□□ -0.21
SDHA-211ENST00000509564 YBX2Q9Y2T7 364 aaKnown RBP13.74□□□□□ -0.21
SDHA-211ENST00000509564 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
SDHA-211ENST00000509564 EYSQ5T1H1 3165 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 MAFGO15525 162 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 NBNO60934 754 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 EFCAB14O75071 495 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 ATP9AO75110 1047 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 CXCL10P02778 98 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 MARK3P27448 753 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 GNA11P29992 359 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 ZNF76P36508 570 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 ZNF200P98182 395 aaPredicted RBP13.73□□□□□ -0.21
SDHA-211ENST00000509564 PPFIA1Q13136 1202 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 HIC1Q14526 733 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 ZNF618Q5T7W0 954 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 MCTP2Q6DN12 878 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 GLG1Q92896 1179 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
SDHA-211ENST00000509564 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 KCNH7Q9NS40 1196 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 MYO9BQ13459 2157 aa13.73□□□□□ -0.21
SDHA-211ENST00000509564 PLXNA4Q9HCM2 1894 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 NRCAMQ92823 1304 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 CPLX1O14810 134 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 TREHO43280 583 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 PRPF3O43395 683 aaKnown RBP13.72□□□□□ -0.21
SDHA-211ENST00000509564 CA3P07451 260 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
SDHA-211ENST00000509564 TOB2Q14106 344 aaPredicted RBP13.72□□□□□ -0.21
SDHA-211ENST00000509564 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 JAKMIP3Q5VZ66 844 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 HERC6Q8IVU3 1022 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
SDHA-211ENST00000509564 PHOSPHO2Q8TCD6 241 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 BICD2Q8TD16 824 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 SEPT1Q8WYJ6 367 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 TM6SF1Q9BZW5 370 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 PRDM12Q9H4Q4 367 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 AZI2Q9H6S1 392 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
SDHA-211ENST00000509564 ZSWIM6Q9HCJ5 1215 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 TUBE1Q9UJT0 475 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 TELO2Q9Y4R8 837 aa13.72□□□□□ -0.21
SDHA-211ENST00000509564 RSPH10B2B2RC85 870 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 DDX39AO00148 427 aaKnown RBP13.71□□□□□ -0.21
SDHA-211ENST00000509564 LGR5O75473 907 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 RSPH10BP0C881 870 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 IFNAR1P17181 557 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 EVCP57679 992 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 GRIK4Q16099 956 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 TAF2Q6P1X5 1199 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.21
SDHA-211ENST00000509564 TRAF7Q6Q0C0 670 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 NIPA1Q7RTP0 329 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 RNPEPQ9H4A4 650 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 SMARCAD1Q9H4L7 1026 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 AGO4Q9HCK5 861 aaKnown RBP13.71□□□□□ -0.21
SDHA-211ENST00000509564 SETD4Q9NVD3 440 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 VPS54Q9P1Q0 977 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
SDHA-211ENST00000509564 ABHD14A-ACY1A0A1B0GW23 586 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 KIF28PB7ZC32 967 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 TLL1O43897 1013 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 EIF5BO60841 1220 aaKnown RBP13.7□□□□□ -0.22
SDHA-211ENST00000509564 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 MYOGP15173 224 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
SDHA-211ENST00000509564 ACTR2P61160 394 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 DEFB103AP81534 67 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 ITGB3BPQ13352 177 aaPredicted RBP13.7□□□□□ -0.22
SDHA-211ENST00000509564 IKBKEQ14164 716 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 MBTPS1Q14703 1052 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 NTRK3Q16288 839 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 PKN1Q16512 942 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 PDRG1Q9NUG6 133 aa13.7□□□□□ -0.22
SDHA-211ENST00000509564 CDKL5O76039 1030 aa13.69□□□□□ -0.22
SDHA-211ENST00000509564 DEXIO95424 95 aa13.69□□□□□ -0.22
SDHA-211ENST00000509564 RPLP2P05387 115 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms