RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PTPRAP18433 802 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 KCNA1Q09470 495 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 MCTP2Q6DN12 878 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 SCFD1Q8WVM8 642 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 LPAR1Q92633 364 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 WDR24Q96S15 920 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 SLC38A10Q9HBR0 1119 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 PPP1R9AQ9ULJ8 1098 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 DYNC1I1O14576 645 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 PSMD10O75832 226 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 SLITRK3O94933 977 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 CCDC40Q4G0X9 1142 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 DCAF15Q66K64 600 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 TRERF1Q96PN7 1200 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 TSG101Q99816 390 aa16.51■□□□□ 0.23
PHF3-209ENST00000509330 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
PHF3-209ENST00000509330 EPHB6O15197 1021 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 BACE1P56817 501 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 TRAF1Q13077 416 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 TRIM65Q6PJ69 517 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 FAM114A1Q8IWE2 563 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 ZNF280CQ8ND82 737 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 CRACR2AQ9BSW2 395 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 MMRN2Q9H8L6 949 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 LUC7L2Q9Y383 392 aaKnown RBP16.5■□□□□ 0.23
PHF3-209ENST00000509330 ITIH6Q6UXX5 1313 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 TMEM150BA6NC51 233 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 URI1O94763 535 aaPredicted RBP16.5■□□□□ 0.23
PHF3-209ENST00000509330 DNM2P50570 870 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 ETF1P62495 437 aaKnown RBP16.5■□□□□ 0.23
PHF3-209ENST00000509330 APBA1Q02410 837 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 LRRC55Q6ZSA7 311 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 KCNH7Q9NS40 1196 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 ATAD5Q96QE3 1844 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 LTBP3Q9NS15 1303 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 TESPA1A2RU30 521 aaPredicted RBP16.5■□□□□ 0.23
PHF3-209ENST00000509330 RASSF10A6NK89 507 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 SP4Q02446 784 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 SYT2Q8N9I0 419 aaPredicted RBP16.5■□□□□ 0.23
PHF3-209ENST00000509330 SYTL5Q8TDW5 730 aaPredicted RBP16.5■□□□□ 0.23
PHF3-209ENST00000509330 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
PHF3-209ENST00000509330 EHMT1Q9H9B1 1298 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 PCDHA2Q9Y5H9 948 aa16.5■□□□□ 0.23
PHF3-209ENST00000509330 ADM5C9JUS6 153 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 GCNT3O95395 438 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 CCDC175P0C221 793 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 KCNJ6P48051 423 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 NDST4Q9H3R1 872 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 ADGRG1Q9Y653 693 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 VWA5AO00534 786 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 PLA2G6O60733 806 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 ZBED4O75132 1171 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 TBCAO75347 108 aaKnown RBP16.49■□□□□ 0.23
PHF3-209ENST00000509330 FKBP15Q5T1M5 1219 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 SNRNP48Q6IEG0 339 aaKnown RBP16.49■□□□□ 0.23
PHF3-209ENST00000509330 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 SLC5A5Q92911 643 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 MXRA8Q9BRK3 442 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 LXNQ9BS40 222 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 RNF181Q9P0P0 153 aa16.49■□□□□ 0.23
PHF3-209ENST00000509330 CLIC2O15247 247 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 LMNB1P20700 586 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 HSD17B4P51659 736 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 MRPS9P82933 396 aaKnown RBP16.48■□□□□ 0.23
PHF3-209ENST00000509330 PSMD2Q13200 908 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 VWA3BQ502W6 1294 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 HSD17B14Q9BPX1 270 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 TEKT3Q9BXF9 490 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 RNF146Q9NTX7 359 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 TRIM10Q9UDY6 481 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 NMT1P30419 496 aaKnown RBP16.48■□□□□ 0.23
PHF3-209ENST00000509330 BAATQ14032 418 aaPredicted RBP16.48■□□□□ 0.23
PHF3-209ENST00000509330 ZC2HC1CQ53FD0 456 aaPredicted RBP16.48■□□□□ 0.23
PHF3-209ENST00000509330 RINT1Q6NUQ1 792 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 RNF207Q6ZRF8 634 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 APOBEC3FQ8IUX4 373 aaKnown RBP16.48■□□□□ 0.23
PHF3-209ENST00000509330 RMDN3Q96TC7 470 aa16.48■□□□□ 0.23
PHF3-209ENST00000509330 CCP110O43303 1012 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 PPP1R2P41236 205 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 LRRC63Q05C16 580 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 MYCT1Q8N699 235 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 ITGB3BPQ13352 177 aaPredicted RBP16.47■□□□□ 0.23
PHF3-209ENST00000509330 ADAM9Q13443 819 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 KLRG1Q96E93 195 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 ATP9AO75110 1047 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
PHF3-209ENST00000509330 MTMR1Q13613 665 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 CYP26C1Q6V0L0 522 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 MIER3Q7Z3K6 550 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 GPC2Q8N158 579 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 OR8K1Q8NGG5 319 aa16.47■□□□□ 0.23
PHF3-209ENST00000509330 FAM13AO94988 1023 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 EYA4O95677 639 aa16.46■□□□□ 0.23
PHF3-209ENST00000509330 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
PHF3-209ENST00000509330 NR2F2P24468 414 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms