RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 RPA1P27694 616 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 GRK4P32298 578 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 FAM160A1Q05DH4 1040 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 ARHGAP1Q07960 439 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 CACNB2Q08289 660 aaPredicted RBP16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 PRAMEF19Q5SWL8 479 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 NCAPH2Q6IBW4 605 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 CCDC73Q6ZRK6 1079 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 USP49Q70CQ1 688 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 MIER3Q7Z3K6 550 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 CTU1Q7Z7A3 348 aaKnown RBP16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 ENGASEQ8NFI3 743 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 UIMC1Q96RL1 719 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 NT5C3AQ9H0P0 336 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 MLXIPQ9HAP2 919 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 TUFT1Q9NNX1 390 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 DISC1Q9NRI5 854 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 CCDC39Q9UFE4 941 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 KCNH3Q9ULD8 1083 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 PCDHA10Q9Y5I2 948 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 PTCH2Q9Y6C5 1203 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 KDM3AQ9Y4C1 1321 aa16.09■□□□□ 0.17
SPOCK1-206ENST00000509293 SEPT4O43236 478 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 PSAPP07602 524 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 ACTR2P61160 394 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 NKX3-2P78367 333 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 PKN2Q16513 984 aaKnown RBP16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 SPECC1Q5M775 1068 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 ABHD15Q6UXT9 468 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 CABP7Q86V35 215 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 TRPV1Q8NER1 839 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 PPTC7Q8NI37 304 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 SNX29Q8TEQ0 813 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 SEPT1Q8WYJ6 367 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 CALML4Q96GE6 196 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 EIF2AK1Q9BQI3 630 aaKnown RBP16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 GOLPH3LQ9H4A5 285 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 BCAS3Q9H6U6 928 aa16.08■□□□□ 0.16
SPOCK1-206ENST00000509293 IGKV6D-21A0A0A0MT36 114 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 A0A1B0GVL5 298 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 PP2D1A8MPX8 630 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 DUSP11O75319 330 aaKnown RBP16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 LYPLA2O95372 231 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 P4HBP07237 508 aaKnown RBP16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 SPATA31C1P0DKV0 1188 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 HOXD8P13378 290 aaPredicted RBP16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 CDC25AP30304 524 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 NDUFA8P51970 172 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 FMR1NBQ8N0W7 255 aaPredicted RBP16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 SPATA33Q96N06 139 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 GPR20Q99678 358 aa16.07■□□□□ 0.16
SPOCK1-206ENST00000509293 GSTTP1A0A1W2PQM5 241 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 CHMP2AO43633 222 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 MSCO60682 206 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 DKC1O60832 514 aaKnown RBP eCLIP16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 SUPT20HL2P0C7V6 817 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 CCT6AP40227 531 aaKnown RBP16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 SYKP43405 635 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 LBX1P52954 281 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 PSMC5P62195 406 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 SNW1Q13573 536 aaKnown RBP16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 TMEM119Q4V9L6 283 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 CATSPER3Q86XQ3 398 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 ELOA2Q8IYF1 753 aaPredicted RBP16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 IQUBQ8NA54 791 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 COPS5Q92905 334 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 TIGD1Q96MW7 591 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 ZSWIM4Q9H7M6 989 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 STK17AQ9UEE5 414 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
SPOCK1-206ENST00000509293 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 A6NJR5 290 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 NOP56O00567 594 aaKnown RBP16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 ADCY6O43306 1168 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 PPFIA4O75335 1185 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 MED24O75448 989 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 LGR5O75473 907 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 SLITRK3O94933 977 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 ZNF202O95125 648 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 INHAP05111 366 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 LIG1P18858 919 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 QARSP47897 775 aaKnown RBP16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 TRIM32Q13049 653 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 GRB10Q13322 594 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 KARSQ15046 597 aaKnown RBP16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 E2F4Q16254 413 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 KLHL40Q2TBA0 621 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 HSDL1Q3SXM5 330 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 TLK2Q86UE8 772 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 GPT2Q8TD30 523 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 AFAP1L1Q8TED9 768 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms