RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 BDP1A6H8Y1 2624 aa14.33□□□□□ -0.11
PDPN-208ENST00000509009 TCF7P36402 384 aaPredicted RBP14.33□□□□□ -0.12
PDPN-208ENST00000509009 MRPS5P82675 430 aaKnown RBP14.33□□□□□ -0.12
PDPN-208ENST00000509009 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
PDPN-208ENST00000509009 RTN1Q16799 776 aa14.33□□□□□ -0.12
PDPN-208ENST00000509009 MICALL1Q8N3F8 863 aa14.33□□□□□ -0.12
PDPN-208ENST00000509009 ASB2Q96Q27 587 aa14.33□□□□□ -0.12
PDPN-208ENST00000509009 RIC8AQ9NPQ8 531 aa14.33□□□□□ -0.12
PDPN-208ENST00000509009 THEGQ9P2T0 379 aa14.33□□□□□ -0.12
PDPN-208ENST00000509009 ZNF215Q9UL58 517 aaPredicted RBP14.33□□□□□ -0.12
PDPN-208ENST00000509009 CNTNAP5Q8WYK1 1306 aa14.33□□□□□ -0.12
PDPN-208ENST00000509009 NRCAMQ92823 1304 aa14.33□□□□□ -0.12
PDPN-208ENST00000509009 REV3LO60673 3130 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 TANC1Q9C0D5 1861 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 KLF18A0A0U1RQI7 1052 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 GTPBP6O43824 516 aaPredicted RBP14.32□□□□□ -0.12
PDPN-208ENST00000509009 LPXNO60711 386 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 CAND2O75155 1236 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 FOSP01100 380 aaPredicted RBP14.32□□□□□ -0.12
PDPN-208ENST00000509009 HMGB1P09429 215 aaKnown RBP14.32□□□□□ -0.12
PDPN-208ENST00000509009 CDC27P30260 824 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 ARHGAP4P98171 946 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 MTMR1Q13613 665 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 FAM26DQ5JW98 314 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 KRT40Q6A162 431 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 FAM117BQ6P1L5 589 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 CYP2W1Q8TAV3 490 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 LMBR1Q8WVP7 490 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 MXRA8Q9BRK3 442 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 PKD2L1Q9P0L9 805 aa14.32□□□□□ -0.12
PDPN-208ENST00000509009 SMCO2A6NFE2 343 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 GOLGA8AA7E2F4 631 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 GOLGA8BA8MQT2 603 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 STXBP3O00186 592 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 CPA1P15085 419 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 ADD1P35611 737 aaKnown RBP14.31□□□□□ -0.12
PDPN-208ENST00000509009 NAPAP54920 295 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 ERVK-21P61565 698 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 GRB10Q13322 594 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 SEPT8Q92599 483 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
PDPN-208ENST00000509009 SMARCAD1Q9H4L7 1026 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 EHMT1Q9H9B1 1298 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 KCNH7Q9NS40 1196 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 BARHL2Q9NY43 387 aa14.31□□□□□ -0.12
PDPN-208ENST00000509009 LINC01553A4QN01 128 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 CHRNA1P02708 482 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 AMHP03971 560 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 CTSHP09668 335 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 ARP10275 920 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 ADCY7P51828 1080 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 RCAN1P53805 252 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 MARCH8Q5T0T0 291 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 RUFY4Q6ZNE9 571 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 RPAINQ86UA6 219 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 GLG1Q92896 1179 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 PGBD1Q96JS3 809 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 TGS1Q96RS0 853 aaKnown RBP14.3□□□□□ -0.12
PDPN-208ENST00000509009 PCYT2Q99447 389 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 TMEM260Q9NX78 707 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 ERAP1Q9NZ08 941 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 INSL6Q9Y581 213 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 SNX14Q9Y5W7 946 aa14.3□□□□□ -0.12
PDPN-208ENST00000509009 DOCK5Q9H7D0 1870 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.29□□□□□ -0.12
PDPN-208ENST00000509009 hCG_1984214I3L0E3 225 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 MEIS1O00470 390 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 MARK3P27448 753 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 HSPA4P34932 840 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 CLK2P49760 499 aaKnown RBP14.29□□□□□ -0.12
PDPN-208ENST00000509009 HTRA4P83105 476 aaPredicted RBP14.29□□□□□ -0.12
PDPN-208ENST00000509009 APOBRQ0VD83 1088 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 PPFIA1Q13136 1202 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 CEP55Q53EZ4 464 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 Q6ZUG5 572 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 MYOCDQ8IZQ8 938 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
PDPN-208ENST00000509009 TOP1MTQ969P6 601 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 CCDC136Q96JN2 1154 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 JAKMIP1Q96N16 626 aaKnown RBP14.29□□□□□ -0.12
PDPN-208ENST00000509009 GLT8D2Q9H1C3 349 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 LMCD1Q9NZU5 365 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 SLC9A2Q9UBY0 812 aa14.29□□□□□ -0.12
PDPN-208ENST00000509009 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
PDPN-208ENST00000509009 MBLAC1A4D2B0 266 aaPredicted RBP14.28□□□□□ -0.12
PDPN-208ENST00000509009 NFASCO94856 1347 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 BMP1P13497 986 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 INSRRP14616 1297 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 FGD1P98174 961 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 TFF2Q03403 129 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 PTPRSQ13332 1948 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 SKIV2LQ15477 1246 aaKnown RBP14.28□□□□□ -0.12
PDPN-208ENST00000509009 GRIK4Q16099 956 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 PFKFB3Q16875 520 aaPredicted RBP14.28□□□□□ -0.12
PDPN-208ENST00000509009 TAF2Q6P1X5 1199 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 ANO3Q9BYT9 981 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 AGO4Q9HCK5 861 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms