RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 BRPF3Q9ULD4 1205 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 SMCO2A6NFE2 343 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 hCG_1984214I3L0E3 225 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 RFXAPO00287 272 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 ATP9AO75110 1047 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 CAND2O75155 1236 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 NEFLP07196 543 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 CTSHP09668 335 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 ITGB5P18084 799 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 TAP1Q03518 808 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 HIC1Q14526 733 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 GPNMBQ14956 572 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 ADCK5Q3MIX3 580 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 TJAP1Q5JTD0 557 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 WWC2Q6AWC2 1192 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 PPP1R18Q6NYC8 613 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 FAM117BQ6P1L5 589 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 RSPH3Q86UC2 560 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 TRIM50Q86XT4 487 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 TEX2Q8IWB9 1127 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 ZNF713Q8N859 430 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 ATXN2LQ8WWM7 1075 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 TNPO1Q92973 898 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 WNT8BQ93098 351 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 JAKMIP1Q96N16 626 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 RAD9AQ99638 391 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 SDF4Q9BRK5 362 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 SMARCAD1Q9H4L7 1026 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 AZI2Q9H6S1 392 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 RIC8AQ9NPQ8 531 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 JADE2Q9NQC1 790 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 ERAP1Q9NZ08 941 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 THEGQ9P2T0 379 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 UBIAD1Q9Y5Z9 338 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 NRCAMQ92823 1304 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 A0A0C4DFX4 3053 aa11.54□□□□□ -0.56
UBE2D3-227ENST00000508818 REC8O95072 547 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 KCNA2P16389 499 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 METAP2P50579 478 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 DEFB103AP81534 67 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 MRPS5P82675 430 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 AKAP17AQ02040 695 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 PPFIA1Q13136 1202 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 BLOC1S2Q6QNY1 142 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 Q6ZUG5 572 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 TMCO2Q7Z6W1 182 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 MYOCDQ8IZQ8 938 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 DBF4BQ8NFT6 615 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 MXRA8Q9BRK3 442 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 JPH1Q9HDC5 661 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 PRDM6Q9NQX0 595 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 CNTNAP5Q8WYK1 1306 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 GBF1Q92538 1859 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
UBE2D3-227ENST00000508818 GSTTP1A0A1W2PQM5 241 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 GJB5O95377 273 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 MARK3P27448 753 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 PSMA5P28066 241 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 RCAN1P53805 252 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 APOBRQ0VD83 1088 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 MBTPS1Q14703 1052 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 TAF2Q6P1X5 1199 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 TRAF7Q6Q0C0 670 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 CCDC12Q8WUD4 166 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 LMBR1Q8WVP7 490 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 BRF1Q92994 677 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 ANO3Q9BYT9 981 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 KCNH7Q9NS40 1196 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 BARHL2Q9NY43 387 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 SLC9A2Q9UBY0 812 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 MTUS1Q9ULD2 1270 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 TELO2Q9Y4R8 837 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 INSL6Q9Y581 213 aa11.52□□□□□ -0.57
UBE2D3-227ENST00000508818 STXBP3O00186 592 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 UPP2O95045 317 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 CPA1P15085 419 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 POU3F3P20264 500 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 CDC27P30260 824 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 HOXC8P31273 242 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 HSPA4P34932 840 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 ADD1P35611 737 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 IGBP1P78318 339 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 AP3B2Q13367 1082 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 GRIK4Q16099 956 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 AAK1Q2M2I8 961 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 TCTN1Q2MV58 587 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 CEP55Q53EZ4 464 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 PLEKHG4Q58EX7 1191 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.51□□□□□ -0.574e-6■■■□□ 19.2
UBE2D3-227ENST00000508818 APBB2Q92870 758 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 PGBD1Q96JS3 809 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 ASB2Q96Q27 587 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 TGS1Q96RS0 853 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 C6orf50Q9HD87 102 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 SNX14Q9Y5W7 946 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 MTCH2Q9Y6C9 303 aa11.51□□□□□ -0.57
UBE2D3-227ENST00000508818 LCHNA4D1U4 455 aa11.5□□□□□ -0.57
UBE2D3-227ENST00000508818 RRN3P2A6NIE6 340 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms