RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GPR20Q99678 358 aa10.34□□□□□ -0.75
NUP54-207ENST00000508583 TEKT3Q9BXF9 490 aa10.34□□□□□ -0.75
NUP54-207ENST00000508583 SMARCAD1Q9H4L7 1026 aa10.34□□□□□ -0.75
NUP54-207ENST00000508583 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
NUP54-207ENST00000508583 PDE4DIPQ5VU43 2346 aa10.34□□□□□ -0.75
NUP54-207ENST00000508583 SCN10AQ9Y5Y9 1956 aa10.34□□□□□ -0.75
NUP54-207ENST00000508583 EMSYQ7Z589 1322 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 WDR64B1ANS9 1081 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 NEMFO60524 1076 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 ATP9AO75110 1047 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 ARP10275 920 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 GNAT1P11488 350 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 JAK3P52333 1124 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 RTP1P59025 263 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 ACTR2P61160 394 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 SP4Q02446 784 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 LRRC26Q2I0M4 334 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 RILPL1Q5EBL4 403 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 BRAPQ7Z569 592 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 SESTD1Q86VW0 696 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 C7orf31Q8N865 590 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 GLG1Q92896 1179 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 LENG9Q96B70 501 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 ERAP1Q9NZ08 941 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 ATP11BQ9Y2G3 1177 aa10.33□□□□□ -0.76
NUP54-207ENST00000508583 H3BRB1 525 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 BACH1O14867 736 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 ADAMTS3O15072 1205 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 MSH4O15457 936 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 PQBP1O60828 265 aaKnown RBP10.32□□□□□ -0.76
NUP54-207ENST00000508583 TDP2O95551 362 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 LGALS2P05162 132 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 PSAPP07602 524 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 CLTBP09497 229 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 ZNF286BP0CG31 522 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 TCF7P36402 384 aaPredicted RBP10.32□□□□□ -0.76
NUP54-207ENST00000508583 PSEN2P49810 448 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 ITGB3BPQ13352 177 aaPredicted RBP10.32□□□□□ -0.76
NUP54-207ENST00000508583 MFSD10Q14728 455 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 CALCRLQ16602 461 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 KIAA0753Q2KHM9 967 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 TRIM60Q495X7 471 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 FAM47CQ5HY64 1035 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 SLC43A3Q8NBI5 491 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 ETNPPLQ8TBG4 499 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 SLC5A5Q92911 643 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 TUT1Q9H6E5 874 aaKnown RBP10.32□□□□□ -0.76
NUP54-207ENST00000508583 NOD1Q9Y239 953 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 SAMM50Q9Y512 469 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 PCDHA10Q9Y5I2 948 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 DNAH12Q6ZR08 3092 aa10.32□□□□□ -0.76
NUP54-207ENST00000508583 VPS37CA5D8V6 355 aaPredicted RBP10.31□□□□□ -0.76
NUP54-207ENST00000508583 DDX39AO00148 427 aaKnown RBP10.31□□□□□ -0.76
NUP54-207ENST00000508583 LAD1O00515 517 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 SORBS3O60504 671 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 DKC1O60832 514 aaKnown RBP eCLIP10.31□□□□□ -0.76
NUP54-207ENST00000508583 ATG7O95352 703 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 BMP15O95972 392 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 RPLP2P05387 115 aaKnown RBP10.31□□□□□ -0.76
NUP54-207ENST00000508583 CDK7P50613 346 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 CHMP4BP1P59074 171 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 NBPF20Q3BBV1 942 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 TTC38Q5R3I4 469 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 UTP14CQ5TAP6 766 aaKnown RBP10.31□□□□□ -0.76
NUP54-207ENST00000508583 PLPPR4Q7Z2D5 763 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 C7orf61Q8IZ16 206 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 CCDC155Q8N6L0 562 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 ATP6V0A1Q93050 837 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 FAM167AQ96KS9 214 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 C16orf70Q9BSU1 422 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 KCNMB3Q9NPA1 279 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 DOCK5Q9H7D0 1870 aa10.31□□□□□ -0.76
NUP54-207ENST00000508583 KAT6AQ92794 2004 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 HAS3O00219 553 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 DHX15O43143 795 aaKnown RBP10.3□□□□□ -0.76
NUP54-207ENST00000508583 SLC37A4O43826 429 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 LGR5O75473 907 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 PSMD10O75832 226 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 ATP2B1P20020 1258 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 MCM7P33993 719 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 STAT5BP51692 787 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 PSMC6P62333 389 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 TLE2Q04725 743 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 PPP2R5CQ13362 524 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 TMEM266Q2M3C6 531 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 EARS2Q5JPH6 523 aaKnown RBP10.3□□□□□ -0.76
NUP54-207ENST00000508583 PDXDC2PQ6P474 469 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 MIER3Q7Z3K6 550 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 FAM126BQ8IXS8 530 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 AFAP1L1Q8TED9 768 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 KAT2BQ92831 832 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 LBHD1Q9BQE6 289 aaPredicted RBP10.3□□□□□ -0.76
NUP54-207ENST00000508583 ZSCAN16Q9H4T2 348 aaPredicted RBP10.3□□□□□ -0.76
NUP54-207ENST00000508583 PRDM5Q9NQX1 630 aaPredicted RBP10.3□□□□□ -0.76
NUP54-207ENST00000508583 ZNF302Q9NR11 478 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 DISC1Q9NRI5 854 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 TMEM39AQ9NV64 488 aa10.3□□□□□ -0.76
NUP54-207ENST00000508583 PCDHA12Q9UN75 941 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms