RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GPR182O15218 404 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 STRNO43815 780 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 XPAP23025 273 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PTPREP23469 700 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 BEX3Q00994 111 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 CUL4BQ13620 913 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ZKSCAN8Q15776 578 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC184Q52MB2 194 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 NUDT18Q6ZVK8 323 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 OTOP2Q7RTS6 562 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 FIBCD1Q8N539 461 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 BADQ92934 168 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 L3MBTL3Q96JM7 780 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TEX13BQ9BXU2 312 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 MAP10Q9P2G4 905 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TXNDC16Q9P2K2 825 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 SIPA1L3O60292 1781 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ESYT2A0FGR8 921 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TYW5A2RUC4 315 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 SMTNL1A8MU46 457 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 KLRF2D3W0D1 207 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 AP1G2O75843 785 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 DDAH1O94760 285 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ZWINTO95229 277 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PRR29P0C7W0 189 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ATP2A2P16615 1042 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 GTF2F1P35269 517 aaKnown RBP eCLIP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 STAT6P42226 847 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF280AP59817 542 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 KCNA10Q16322 511 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 SPECC1Q5M775 1068 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 DSTYKQ6XUX3 929 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 RHPN2Q8IUC4 686 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PPP1R14CQ8TAE6 165 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 DYDC1Q8WWB3 177 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TSC1Q92574 1164 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 FNBP1Q96RU3 617 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 IFT122Q9HBG6 1241 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 GNEQ9Y223 722 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 SLC45A1Q9Y2W3 748 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 A0A0G2JLL6 359 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PNMA6FA0A0J9YX94 578 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ARHGEF37A1IGU5 675 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 XPOTO43592 962 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 EFCAB14O75071 495 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 MYBP10242 640 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 P4HA1P13674 534 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 CEP135Q66GS9 1140 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PRRT2Q7Z6L0 340 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 FBXO33Q7Z6M2 555 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 GABPB2Q8TAK5 448 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 P2RX7Q99572 595 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 EXOC1Q9NV70 894 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 STIM2Q9P246 746 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 STAP2Q9UGK3 403 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PHIPQ8WWQ0 1821 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 POLR2AP24928 1970 aaKnown RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 DAPK3O43293 454 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 TLR2O60603 784 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 LETM1O95202 739 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 SKIP12755 728 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 PTPRAP18433 802 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 MLLT3P42568 568 aaPredicted RBP3.26□□□□□ -1.89
NEDD4-208ENST00000508342 EPHA10Q5JZY3 1008 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 LRCH2Q5VUJ6 765 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF449Q6P9G9 518 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 CYFIP1Q7L576 1253 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ADGRF4Q8IZF3 695 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 ANKRD44Q8N8A2 993 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 MMS19Q96T76 1030 aa3.26□□□□□ -1.89
NEDD4-208ENST00000508342 APC2O95996 2303 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 HOXA2O43364 376 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PGK1P00558 417 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 MTIF2P46199 727 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 LIG4P49917 911 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PSMC6P62333 389 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA8FQ08AF8 430 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA8DPQ0D2H9 430 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PRPF4BQ13523 1007 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 BTG3Q14201 252 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 SH3D19Q5HYK7 790 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 HAUS3Q68CZ6 603 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 MAFAQ8NHW3 353 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 U2AF1L4Q8WU68 220 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 STAMQ92783 540 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 ATOH1Q92858 354 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 POP1Q99575 1024 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 MTRQ99707 1265 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PYM1Q9BRP8 204 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 INO80BQ9C086 356 aaPredicted RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC113Q9H0I3 377 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GPR108Q9NPR9 543 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 FNDC3AQ9Y2H6 1198 aaKnown RBP3.25□□□□□ -1.89
NEDD4-208ENST00000508342 PCDHAC2Q9Y5I4 1007 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GOLGA6L10A0A0M3HER8 536 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 GIPC1O14908 333 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 MAP3K7O43318 606 aa3.25□□□□□ -1.89
NEDD4-208ENST00000508342 STX10O60499 249 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms