RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CYP2W1Q8TAV3 490 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 GAS2L1Q99501 681 aaPredicted RBP16.35■□□□□ 0.21
RAB28-205ENST00000508274 JADE2Q9NQC1 790 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 SETD4Q9NVD3 440 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 NID2Q14112 1375 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 SIP14410 1827 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 PPFIA3O75145 1194 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 DEFB103AP81534 67 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 CNKSR3Q6P9H4 555 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 HERC6Q8IVU3 1022 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 GIMAP8Q8ND71 665 aaPredicted RBP16.34■□□□□ 0.21
RAB28-205ENST00000508274 CDHR1Q96JP9 859 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 ANO3Q9BYT9 981 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 ZNF215Q9UL58 517 aaPredicted RBP16.34■□□□□ 0.21
RAB28-205ENST00000508274 XIRP2A4UGR9 3374 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 GSTTP1A0A1W2PQM5 241 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 hCG_1984214I3L0E3 225 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 PARNO95453 639 aaKnown RBP16.34■□□□□ 0.21
RAB28-205ENST00000508274 CLK2P49760 499 aaKnown RBP16.34■□□□□ 0.21
RAB28-205ENST00000508274 PFKFB3Q16875 520 aaPredicted RBP16.34■□□□□ 0.21
RAB28-205ENST00000508274 ZNF713Q8N859 430 aaPredicted RBP16.34■□□□□ 0.21
RAB28-205ENST00000508274 PHOSPHO2Q8TCD6 241 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 LMBR1Q8WVP7 490 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 AGXT2Q9BYV1 514 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 OSBPL7Q9BZF2 842 aa16.34■□□□□ 0.21
RAB28-205ENST00000508274 CUL9Q8IWT3 2517 aa16.33■□□□□ 0.21
RAB28-205ENST00000508274 SPTBN5Q9NRC6 3674 aaKnown RBP16.33■□□□□ 0.2
RAB28-205ENST00000508274 CTSHP09668 335 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 SCG2P13521 617 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 MARK3P27448 753 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 KCNJ6P48051 423 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 ADAM17P78536 824 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 PKN1Q16512 942 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 SPRED2Q7Z698 418 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 PPM1EQ8WY54 764 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 PHKBQ93100 1093 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 CERS4Q9HA82 394 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 KCNH7Q9NS40 1196 aa16.33■□□□□ 0.2
RAB28-205ENST00000508274 RSPH10B2B2RC85 870 aa16.32■□□□□ 0.2
RAB28-205ENST00000508274 RSPH10BP0C881 870 aa16.32■□□□□ 0.2
RAB28-205ENST00000508274 ARP10275 920 aa16.32■□□□□ 0.2
RAB28-205ENST00000508274 IGFBP4P22692 258 aa16.32■□□□□ 0.2
RAB28-205ENST00000508274 ARHGAP4P98171 946 aa16.32■□□□□ 0.2
RAB28-205ENST00000508274 JAKMIP3Q5VZ66 844 aa16.32■□□□□ 0.2
RAB28-205ENST00000508274 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
RAB28-205ENST00000508274 SEPT1Q8WYJ6 367 aa16.32■□□□□ 0.2
RAB28-205ENST00000508274 COL4A4P53420 1690 aaPredicted RBP16.32■□□□□ 0.2
RAB28-205ENST00000508274 CCDC196A0A1B0GTZ2 297 aa16.31■□□□□ 0.2
RAB28-205ENST00000508274 LCHNA4D1U4 455 aa16.31■□□□□ 0.2
RAB28-205ENST00000508274 EPOPA6NHQ4 379 aa16.31■□□□□ 0.2
RAB28-205ENST00000508274 RFXAPO00287 272 aa16.31■□□□□ 0.2
RAB28-205ENST00000508274 FOSP01100 380 aaPredicted RBP16.31■□□□□ 0.2
RAB28-205ENST00000508274 SREBF1P36956 1147 aa16.31■□□□□ 0.2
RAB28-205ENST00000508274 AP3B2Q13367 1082 aa16.31■□□□□ 0.2
RAB28-205ENST00000508274 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
RAB28-205ENST00000508274 PCYT2Q99447 389 aa16.31■□□□□ 0.2
RAB28-205ENST00000508274 NCOA5Q9HCD5 579 aaKnown RBP16.31■□□□□ 0.2
RAB28-205ENST00000508274 JPH1Q9HDC5 661 aaPredicted RBP16.31■□□□□ 0.2
RAB28-205ENST00000508274 PRDM6Q9NQX0 595 aa16.31■□□□□ 0.2
RAB28-205ENST00000508274 MAFGO15525 162 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 TLL1O43897 1013 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 LGR5O75473 907 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 GNAT1P11488 350 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 PSMA5P28066 241 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 CCT2P78371 535 aaKnown RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 TAP1Q03518 808 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 ITGB3BPQ13352 177 aaPredicted RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 NTRK3Q16288 839 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 CEP55Q53EZ4 464 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.3■□□□□ 0.21e-9■■■■■ 43.8
RAB28-205ENST00000508274 RUFY4Q6ZNE9 571 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 RUFY3Q7L099 469 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 DBF4BQ8NFT6 615 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 GLG1Q92896 1179 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 SLC9A2Q9UBY0 812 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 PRRC2BQ5JSZ5 2229 aaKnown RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 EMSYQ7Z589 1322 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 NRCAMQ92823 1304 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 ABHD14A-ACY1A0A1B0GW23 586 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 PDIA3P30101 505 aaKnown RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 PPFIA1Q13136 1202 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 IKBKEQ14164 716 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 CCDC85BQ15834 202 aaPredicted RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 PLEKHG4Q58EX7 1191 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 ZBTB10Q96DT7 871 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 COL25A1Q9BXS0 654 aaPredicted RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 ZSWIM6Q9HCJ5 1215 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 AGO4Q9HCK5 861 aaKnown RBP16.3■□□□□ 0.2
RAB28-205ENST00000508274 ERAP1Q9NZ08 941 aa16.3■□□□□ 0.2
RAB28-205ENST00000508274 MUC3AQ02505 3323 aa16.29■□□□□ 0.2
RAB28-205ENST00000508274 NFASCO94856 1347 aa16.29■□□□□ 0.2
RAB28-205ENST00000508274 KIF28PB7ZC32 967 aa16.29■□□□□ 0.2
RAB28-205ENST00000508274 FAM86B1E9PN63 330 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms