RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CFTRP13569 1480 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 CCDC194A0A1B0GVG4 234 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 GNAT2P19087 354 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 CD9P21926 228 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 SERPINB6P35237 376 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 RGS2P41220 211 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ALDH5A1P51649 535 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 EMP3P54852 163 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 FANCCQ00597 558 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 GUCY1A3Q02108 690 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 DCTN2Q13561 401 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 NCAPHQ15003 741 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 CRY1Q16526 586 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 LIN52Q52LA3 116 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 C14orf80Q86SX3 495 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 IQCKQ8N0W5 287 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 RBBP8NLQ8NC74 664 aaPredicted RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ASAP3Q8TDY4 903 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 DNAJC9Q8WXX5 260 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ATP6V1G3Q96LB4 118 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 NSMCE3Q96MG7 304 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 CEP63Q96MT8 703 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ESYT1Q9BSJ8 1104 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ZNHIT2Q9UHR6 403 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 TSC22D4Q9Y3Q8 395 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 ZNF536O15090 1300 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 PDS5AQ29RF7 1337 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 LMTK3Q96Q04 1460 aa11.74□□□□□ -0.53
PDLIM5-210ENST00000508216 E9PMD0 336 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 APBB1O00213 710 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 HAT1O14929 419 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 ZNF254O75437 659 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 OXSR1O95747 527 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 APOEP02649 317 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 CHGBP05060 677 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 SCG2P13521 617 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 SEC24CP53992 1094 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 CACNA2D1P54289 1103 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 TBL3Q12788 808 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 PAK2Q13177 524 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 C15orf59Q2T9L4 293 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 TRAPPC11Q7Z392 1133 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 DDX42Q86XP3 938 aaKnown RBP eCLIP11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 NUP93Q8N1F7 819 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 LILRB2Q8N423 598 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 CCDC197Q8NCU1 140 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 ANKRD49Q8WVL7 239 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 CEP295NLQ96MC4 621 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 PSKH2Q96QS6 385 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 ARHGEF38Q9NXL2 777 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 INTUQ9ULD6 942 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 KIAA1257Q9ULG3 409 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 SCAF8Q9UPN6 1271 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 ATP7BP35670 1465 aa11.73□□□□□ -0.53
PDLIM5-210ENST00000508216 GOLGA8CPA6NN73 597 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 E9PBE3 544 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 PYGMP11217 842 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 PIM1P11309 404 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 PCP11498 1178 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 PTDSS1P48651 473 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 RELAQ04206 551 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 RASIP1Q5U651 963 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 TTC23LQ6PF05 361 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 RASGRP2Q7LDG7 609 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 BBS5Q8N3I7 341 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 FBXO41Q8TF61 875 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 COG3Q96JB2 828 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 PGBD1Q96JS3 809 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 EGLN2Q96KS0 407 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 PLEKHF1Q96S99 279 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 SEC62Q99442 399 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 NDEL1Q9GZM8 345 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 ESF1Q9H501 851 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 AGAP1Q9UPQ3 857 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 NOX1Q9Y5S8 564 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 ADGRG1Q9Y653 693 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 KNDC1Q76NI1 1749 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 CDK12Q9NYV4 1490 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 CARMIL2Q6F5E8 1435 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 KCNJ13O60928 360 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 GLRX3O76003 335 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 ZBED1O96006 694 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 LMNAP02545 664 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 MYBL1P10243 752 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 KIF23Q02241 960 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 EAPPQ56P03 285 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 PHLDB3Q6NSJ2 640 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 MMGT1Q8N4V1 131 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 TOR1AIP2Q8NFQ8 470 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 STK32AQ8WU08 396 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 ZC3H15Q8WU90 426 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 KRT23Q9C075 422 aa11.72□□□□□ -0.53
PDLIM5-210ENST00000508216 UNKQ9C0B0 810 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms