RNA–Protein interactions for RNA: ENST00000508164.5

TSPAN17-207, Transcript of tetraspanin 17, humanhuman

TSL 1 (best) BASIC

Gene TSPAN17, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-207ENST00000508164 SHROOM1Q2M3G4 852 aaPredicted RBP23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 EMBQ6PCB8 327 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 CCDC65Q8IXS2 484 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 ZIM3Q96PE6 472 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 SERPINB13Q9UIV8 391 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 POTEFA5A3E0 1075 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 MED24O75448 989 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 HEXIM1O94992 359 aaKnown RBP23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 POTEIP0CG38 1075 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 CYP11B2P19099 503 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 SCNN1DP51172 638 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 KLHL30Q0D2K2 578 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 SLC18A3Q16572 532 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 KCTD16Q68DU8 428 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 POTEGQ6S5H5 508 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 POTEEQ6S8J3 1075 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 TBC1D22AQ8WUA7 517 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 KRT12Q99456 494 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 GOLPH3Q9H4A6 298 aa23.65■■□□□ 1.38
TSPAN17-207ENST00000508164 KRT14P02533 472 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 SHMT1P34896 483 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 CRY2Q49AN0 593 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 ARSHQ5FYA8 562 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 SH2D3CQ8N5H7 860 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 CEP63Q96MT8 703 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 CAPS2Q9BXY5 557 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 ARFGEF1Q9Y6D6 1849 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 KRT18P05783 430 aaKnown RBP23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 CCT5P48643 541 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 GUCY2FP51841 1108 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 KCNH2Q12809 1159 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 PPP1R18Q6NYC8 613 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 CERS5Q8N5B7 392 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 SYN2Q92777 582 aaPredicted RBP23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 RBM17Q96I25 401 aaKnown RBP23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 NT5C3AQ9H0P0 336 aa23.64■■□□□ 1.37
TSPAN17-207ENST00000508164 MEIS1O00470 390 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 HSF2BPO75031 334 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 EPS15P42566 896 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 GNGT1P63211 74 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 PPFIA1Q13136 1202 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 SEPT2Q15019 361 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 VPS72Q15906 364 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 RUBCNQ92622 972 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 RUFY1Q96T51 708 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 USP40Q9NVE5 1235 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 ATF5Q9Y2D1 282 aaPredicted RBP23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 EP400Q96L91 3159 aa23.63■■□□□ 1.37
TSPAN17-207ENST00000508164 GOLGA8KD6RF30 607 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 SERPINB2P05120 415 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 SLC9A1P19634 815 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 PSMC6P62333 389 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 HYIQ5T013 277 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 CAVIN3Q969G5 261 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 NUCKS1Q9H1E3 243 aaKnown RBP23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 GANQ9H2C0 597 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 LRRC4BQ9NT99 713 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 FAM196BA6NMK8 535 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 CORO7P57737 925 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 SNAP25P60880 206 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 MEI1Q5TIA1 1274 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 FOXR2Q6PJQ5 311 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 CCDC43Q96MW1 224 aaKnown RBP23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 BCAS3Q9H6U6 928 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 GRIN2DO15399 1336 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 KDM3AQ9Y4C1 1321 aa23.62■■□□□ 1.37
TSPAN17-207ENST00000508164 GRID2IPA4D2P6 1211 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 OPA1O60313 960 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 ASIC2Q16515 512 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 IFT20Q8IY31 132 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 CERKQ8TCT0 537 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 GDF3Q9NR23 364 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 TSKSQ9UJT2 592 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 TAF1LQ8IZX4 1826 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 FOCADQ5VW36 1801 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 NR2F2P24468 414 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 QRICH1Q2TAL8 776 aa23.61■■□□□ 1.37
TSPAN17-207ENST00000508164 GNA14O95837 355 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 GCFC2P16383 781 aaKnown RBP23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 TNFRSF8P28908 595 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 PTK2Q05397 1052 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 PROCA1Q8NCQ7 364 aaPredicted RBP23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 BCAS4Q8TDM0 211 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 CASKIN2Q8WXE0 1202 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 P2RX7Q99572 595 aaKnown RBP23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 PCDHGC5Q9Y5F6 944 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 MAGEA9P43362 315 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 ATP1A2P50993 1020 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 MARSP56192 900 aaKnown RBP23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 NFIAQ12857 509 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 GLE1Q53GS7 698 aaKnown RBP23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 ALS2CLQ60I27 953 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 ZFPM1Q8IX07 1006 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 KLHL7Q8IXQ5 586 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 INPP4AQ96PE3 977 aaPredicted RBP23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 AIPL1Q9NZN9 384 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 HDAC9Q9UKV0 1011 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 PCDHA1Q9Y5I3 950 aa23.6■■□□□ 1.37
TSPAN17-207ENST00000508164 TAL1P17542 331 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms