RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 GPATCH11Q8N954 259 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 NEDD1Q8NHV4 660 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 NLRP3Q96P20 1036 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 ISCUQ9H1K1 167 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 PLCB1Q9NQ66 1216 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 ATAD5Q96QE3 1844 aa14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 COL5A3P25940 1745 aaPredicted RBP14.74□□□□□ -0.05
SNCAIP-209ENST00000508017 LOC102724159A0A0B4J2E5 919 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 ESYT2A0FGR8 921 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 H0YGN5 161 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 CLSTN1O94985 981 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 BAG3O95817 575 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 ADCY7P51828 1080 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 PTK2Q05397 1052 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 PDIA5Q14554 519 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 PWP2Q15269 919 aaKnown RBP14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 RPS6KA1Q15418 735 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 ARHGAP27Q6ZUM4 889 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 SPATS2Q86XZ4 545 aaKnown RBP14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 TAF4BQ92750 862 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 CABS1Q96KC9 395 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 RAB34Q9BZG1 259 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 NFS1Q9Y697 457 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 MYH7BA7E2Y1 1941 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 E9PMD0 336 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 CEP104O60308 925 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 KIF4AO95239 1232 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 FAM107AO95990 144 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 FLT3P36888 993 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 NT5C2P49902 561 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 C16orf86Q6ZW13 317 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 MICALCLQ6ZW33 695 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 HAS1Q92839 578 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 RIOX1Q9H6W3 641 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 AIPL1Q9NZN9 384 aa14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 SRP68Q9UHB9 627 aaKnown RBP14.73□□□□□ -0.05
SNCAIP-209ENST00000508017 BACH1O14867 736 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 PPP4CP60510 307 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 ZNF844Q08AG5 666 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 ZNF571Q7Z3V5 609 aaPredicted RBP14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 C1orf131Q8NDD1 294 aaKnown RBP14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 SCFD2Q8WU76 684 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 MYCBPQ99417 103 aaPredicted RBP14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 RTFDC1Q9BY42 306 aaPredicted RBP14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 DDX47Q9H0S4 455 aaKnown RBP14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 PCDHA2Q9Y5H9 948 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 TMOD1P28289 359 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 BTDP43251 543 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 FOXR2Q6PJQ5 311 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 YTHDF3Q7Z739 585 aaKnown RBP14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 CLEC10AQ8IUN9 316 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 LRRC47Q8N1G4 583 aaKnown RBP14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 WDR66Q8TBY9 1149 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 SCFD1Q8WVM8 642 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 CYFIP2Q96F07 1278 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 CEP63Q96MT8 703 aa14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 BCCIPQ9P287 314 aaKnown RBP eCLIP14.72□□□□□ -0.05
SNCAIP-209ENST00000508017 GOLGA6L10A6NI86 522 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 GCOM1H8Y6P7 765 aaPredicted RBP14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 MYZAPP0CAP1 466 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 PDHBP11177 359 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 SLC9A1P19634 815 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 USP8P40818 1118 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 USP11P51784 963 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 QPCTQ16769 361 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 SPRED3Q2MJR0 410 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 C6orf89Q6UWU4 347 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 IRF2BP2Q7Z5L9 587 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 CCDC91Q7Z6B0 441 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 NBPF5PQ86XG9 351 aaPredicted RBP14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 CCDC13Q8IYE1 715 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 LRRC27Q9C0I9 530 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 KCTD10Q9H3F6 313 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 VCPKMTQ9H867 229 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 LRRC4CQ9HCJ2 640 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 CD248Q9HCU0 757 aa14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 COL16A1Q07092 1604 aaPredicted RBP14.71□□□□□ -0.05
SNCAIP-209ENST00000508017 ARFGEF1Q9Y6D6 1849 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 ITGA4P13612 1032 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 TM4SF1P30408 202 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 CTNNA1P35221 906 aaKnown RBP14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 EPS15P42566 896 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 EIF6P56537 245 aaKnown RBP14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 ACTN3Q08043 901 aaPredicted RBP14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 KCNH2Q12809 1159 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 PPP4R3AQ6IN85 833 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 LRIG3Q6UXM1 1119 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 LRRC57Q8N9N7 239 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 GPCPD1Q9NPB8 672 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 ANKIB1Q9P2G1 1089 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 CNOT8Q9UFF9 292 aaKnown RBP14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 DDX25Q9UHL0 483 aaKnown RBP14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 SLC12A6Q9UHW9 1150 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 FBXL5Q9UKA1 691 aa14.71□□□□□ -0.06
SNCAIP-209ENST00000508017 DCDC2CA8MYV0 355 aa14.7□□□□□ -0.06
SNCAIP-209ENST00000508017 SART1O43290 800 aaKnown RBP14.7□□□□□ -0.06
SNCAIP-209ENST00000508017 ZBTB48P10074 688 aaPredicted RBP14.7□□□□□ -0.06
SNCAIP-209ENST00000508017 SMARCA1P28370 1054 aa14.7□□□□□ -0.06
SNCAIP-209ENST00000508017 MARSP56192 900 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms