RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CASQ1P31415 396 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 ARHGAP25P42331 645 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 MAP3K9P80192 1104 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 SAMD7Q7Z3H4 446 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 KRT26Q7Z3Y9 468 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 RIT2Q99578 217 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 MXRA8Q9BRK3 442 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 EDEM3Q9BZQ6 932 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 TRAF3IP3Q9Y228 551 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 PES1O00541 588 aaKnown RBP19.56■□□□□ 0.72
SFXN1-208ENST00000507823 NDUFA10O95299 355 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 FDX1P10109 184 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 TRIM21P19474 475 aaKnown RBP19.56■□□□□ 0.72
SFXN1-208ENST00000507823 RASSF7Q02833 373 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 AGPAT5Q9NUQ2 364 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 MYO1AQ9UBC5 1043 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 PPP1R9AQ9ULJ8 1098 aa19.56■□□□□ 0.72
SFXN1-208ENST00000507823 REXO2Q9Y3B8 237 aaKnown RBP19.56■□□□□ 0.72
SFXN1-208ENST00000507823 KLK7P49862 253 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 DCAF15Q66K64 600 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 ACRBPQ8NEB7 543 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 KRT18P05783 430 aaKnown RBP19.55■□□□□ 0.72
SFXN1-208ENST00000507823 USP14P54578 494 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 HSP90AA2PQ14568 343 aaPredicted RBP19.55■□□□□ 0.72
SFXN1-208ENST00000507823 EPHA7Q15375 998 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 OLFML3Q9NRN5 406 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 RGL1Q9NZL6 768 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 COL20A1Q9P218 1284 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 SCAF8Q9UPN6 1271 aaKnown RBP19.55■□□□□ 0.72
SFXN1-208ENST00000507823 RLFQ13129 1914 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 TSR1Q2NL82 804 aaKnown RBP19.55■□□□□ 0.72
SFXN1-208ENST00000507823 TBC1D10BQ4KMP7 808 aaPredicted RBP19.55■□□□□ 0.72
SFXN1-208ENST00000507823 TRIM59Q8IWR1 403 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 CCDC170Q8IYT3 715 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 HOOK2Q96ED9 719 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 RUSC1Q9BVN2 902 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 BHMT2Q9H2M3 363 aa19.55■□□□□ 0.72
SFXN1-208ENST00000507823 PHIPQ8WWQ0 1821 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 A0A0U1RQJ8 604 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 GAS7O60861 476 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 ARP10275 920 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 GAP43P17677 238 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 VCAM1P19320 739 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
SFXN1-208ENST00000507823 NAA30Q147X3 362 aaPredicted RBP19.54■□□□□ 0.72
SFXN1-208ENST00000507823 NBPF12Q5TAG4 269 aaPredicted RBP19.54■□□□□ 0.72
SFXN1-208ENST00000507823 RINT1Q6NUQ1 792 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 NEK9Q8TD19 979 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 ATRIPQ8WXE1 791 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 MRFAP1Q9Y605 127 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 DICER1Q9UPY3 1922 aaKnown RBP19.54■□□□□ 0.72
SFXN1-208ENST00000507823 TRAF5O00463 557 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 NFIBO00712 420 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 KIF5CO60282 957 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 HOXD13P35453 343 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 CYP4A11Q02928 519 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 C1orf186Q6ZWK4 172 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 SFR1Q86XK3 245 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 SCYL3Q8IZE3 742 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 ZNF577Q9BSK1 485 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 KCND2Q9NZV8 630 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 TBC1D7Q9P0N9 293 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 PLAGL2Q9UPG8 496 aa19.54■□□□□ 0.72
SFXN1-208ENST00000507823 ZNF541Q9H0D2 1346 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 APOBEC3FQ8IUX4 373 aaKnown RBP19.53■□□□□ 0.72
SFXN1-208ENST00000507823 ZNF397Q8NF99 534 aaPredicted RBP19.53■□□□□ 0.72
SFXN1-208ENST00000507823 DYDC2Q96IM9 177 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 C12orf42Q96LP6 360 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 TEKT3Q9BXF9 490 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 UNC45AQ9H3U1 944 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 UBIAD1Q9Y5Z9 338 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 PDXKO00764 312 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 URI1O94763 535 aaPredicted RBP19.53■□□□□ 0.72
SFXN1-208ENST00000507823 ITGB5P18084 799 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 CASP5P51878 434 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 PCNX4Q63HM2 1172 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 LZTFL1Q9NQ48 299 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 FAM184BQ9ULE4 1060 aa19.53■□□□□ 0.72
SFXN1-208ENST00000507823 KNOP1Q1ED39 458 aaKnown RBP19.52■□□□□ 0.72
SFXN1-208ENST00000507823 SYTL5Q8TDW5 730 aaPredicted RBP19.52■□□□□ 0.72
SFXN1-208ENST00000507823 ZNHIT6Q9NWK9 470 aaKnown RBP19.52■□□□□ 0.72
SFXN1-208ENST00000507823 EIF3CLB5ME19 914 aaKnown RBP19.52■□□□□ 0.71
SFXN1-208ENST00000507823 IPO5O00410 1097 aaKnown RBP19.52■□□□□ 0.71
SFXN1-208ENST00000507823 ZNF131P52739 623 aa19.52■□□□□ 0.71
SFXN1-208ENST00000507823 UBXN2AP68543 259 aa19.52■□□□□ 0.71
SFXN1-208ENST00000507823 MTMR2Q13614 643 aa19.52■□□□□ 0.71
SFXN1-208ENST00000507823 TUBB2AQ13885 445 aa19.52■□□□□ 0.71
SFXN1-208ENST00000507823 CTTNQ14247 550 aaKnown RBP19.52■□□□□ 0.71
SFXN1-208ENST00000507823 NACC1Q96RE7 527 aa19.52■□□□□ 0.71
SFXN1-208ENST00000507823 EIF3CQ99613 913 aaKnown RBP19.52■□□□□ 0.71
SFXN1-208ENST00000507823 TUBB2BQ9BVA1 445 aa19.52■□□□□ 0.71
SFXN1-208ENST00000507823 IRX2Q9BZI1 471 aaPredicted RBP19.52■□□□□ 0.71
SFXN1-208ENST00000507823 GJA3Q9Y6H8 435 aa19.52■□□□□ 0.71
SFXN1-208ENST00000507823 EIF3DO15371 548 aaKnown RBP eCLIP19.51■□□□□ 0.71
SFXN1-208ENST00000507823 BACE1P56817 501 aa19.51■□□□□ 0.71
SFXN1-208ENST00000507823 RAD51AP2Q09MP3 1159 aa19.51■□□□□ 0.71
SFXN1-208ENST00000507823 KCNMA1Q12791 1236 aa19.51■□□□□ 0.71
SFXN1-208ENST00000507823 R3HDM1Q15032 1099 aaKnown RBP19.51■□□□□ 0.71
SFXN1-208ENST00000507823 NFIL3Q16649 462 aa19.51■□□□□ 0.71
SFXN1-208ENST00000507823 ARHGAP29Q52LW3 1261 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms