RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 KLHL7Q8IXQ5 586 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 LRRC57Q8N9N7 239 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.45■□□□□ 0.73e-9■□□□□ 10
NUP54-205ENST00000507257 ATP6V0A4Q9HBG4 840 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 POLD4Q9HCU8 107 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 GSTA1P08263 222 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 GCFC2P16383 781 aaKnown RBP19.45■□□□□ 0.7
NUP54-205ENST00000507257 NAPAP54920 295 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 POLR2FP61218 127 aaKnown RBP19.45■□□□□ 0.7
NUP54-205ENST00000507257 ATP2B2Q01814 1243 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 KLHL30Q0D2K2 578 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 ASIC2Q16515 512 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 QPCTQ16769 361 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 TMEM266Q2M3C6 531 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 TLCD1Q96CP7 247 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 GANQ9H2C0 597 aa19.45■□□□□ 0.7
NUP54-205ENST00000507257 TPX2Q9ULW0 747 aaKnown RBP19.45■□□□□ 0.7
NUP54-205ENST00000507257 MYH7BA7E2Y1 1941 aa19.44■□□□□ 0.7
NUP54-205ENST00000507257 hCG_1984214I3L0E3 225 aa19.44■□□□□ 0.7
NUP54-205ENST00000507257 KCNK3O14649 394 aa19.44■□□□□ 0.7
NUP54-205ENST00000507257 SART1O43290 800 aaKnown RBP19.44■□□□□ 0.7
NUP54-205ENST00000507257 CAMTA2O94983 1202 aa19.44■□□□□ 0.7
NUP54-205ENST00000507257 CRYMQ14894 314 aa19.44■□□□□ 0.7
NUP54-205ENST00000507257 ZNF713Q8N859 430 aaPredicted RBP19.44■□□□□ 0.7
NUP54-205ENST00000507257 MIEF2Q96C03 454 aa19.44■□□□□ 0.7
NUP54-205ENST00000507257 CDK5RAP3Q96JB5 506 aa19.44■□□□□ 0.7
NUP54-205ENST00000507257 FAM114A2Q9NRY5 505 aa19.44■□□□□ 0.7
NUP54-205ENST00000507257 SMCO2A6NFE2 343 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 CLGNO14967 610 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 DRD4P21917 467 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 TMC3Q7Z5M5 1100 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 SLFN11Q7Z7L1 901 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 FBXL5Q9UKA1 691 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 A0A0A6YYK5 440 aaPredicted RBP19.43■□□□□ 0.7
NUP54-205ENST00000507257 EVA1CP58658 441 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 SF3B3Q15393 1217 aaKnown RBP19.43■□□□□ 0.7
NUP54-205ENST00000507257 ERMARDQ5T6L9 678 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 CCDC26Q8TAB7 109 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 TBCKQ8TEA7 893 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 DDX12PQ92771 950 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 N4BP2L2Q92802 583 aaPredicted RBP19.43■□□□□ 0.7
NUP54-205ENST00000507257 CNOT8Q9UFF9 292 aaKnown RBP19.43■□□□□ 0.7
NUP54-205ENST00000507257 TTC7AQ9ULT0 858 aaPredicted RBP19.43■□□□□ 0.7
NUP54-205ENST00000507257 NENFQ9UMX5 172 aa19.43■□□□□ 0.7
NUP54-205ENST00000507257 PACSIN2Q9UNF0 486 aaPredicted RBP19.43■□□□□ 0.7
NUP54-205ENST00000507257 PRKCIP41743 596 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 CALCRLQ16602 461 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 SPRED3Q2MJR0 410 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 TLDC1Q6P9B6 456 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 LMBR1Q8WVP7 490 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 PSMD1Q99460 953 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 PACSIN1Q9BY11 444 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 TXLNGYQ9BZA5 131 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 NEUROG2Q9H2A3 272 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 HAUS2Q9NVX0 235 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 MCM9Q9NXL9 1143 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 SUCLA2Q9P2R7 463 aaPredicted RBP19.42■□□□□ 0.7
NUP54-205ENST00000507257 ADAMTS1Q9UHI8 967 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 INTUQ9ULD6 942 aa19.42■□□□□ 0.7
NUP54-205ENST00000507257 KLRF2D3W0D1 207 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 F8VZ95 297 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 PPIP5K2O43314 1243 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 NPEPPSP55786 919 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 RIPK1Q13546 671 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 RAPGEF1Q13905 1077 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 PPP2R5EQ16537 467 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 ODF2Q5BJF6 829 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 INTS5Q6P9B9 1019 aaKnown RBP19.41■□□□□ 0.7
NUP54-205ENST00000507257 CRELD2Q6UXH1 353 aaPredicted RBP19.41■□□□□ 0.7
NUP54-205ENST00000507257 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 DYMQ7RTS9 669 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 DNAJC19Q96DA6 116 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 CENPHQ9H3R5 247 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 NOVA2Q9UNW9 492 aaKnown RBP19.41■□□□□ 0.7
NUP54-205ENST00000507257 NOC2LQ9Y3T9 749 aaKnown RBP19.41■□□□□ 0.7
NUP54-205ENST00000507257 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.41■□□□□ 0.7
NUP54-205ENST00000507257 TRAF5O00463 557 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 SLC26A4O43511 780 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 CEP104O60308 925 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 PPFIA2O75334 1257 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 ERCC3P19447 782 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 TMOD1P28289 359 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 DNA2P51530 1060 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 COASYQ13057 564 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 ITIH4Q14624 930 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 SOGA3Q5TF21 947 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 REXO1Q8N1G1 1221 aaKnown RBP19.41■□□□□ 0.7
NUP54-205ENST00000507257 OR2W6PQ8NHA6 318 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 HVCN1Q96D96 273 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 CHMP6Q96FZ7 201 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 TMEM47Q9BQJ4 181 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.41■□□□□ 0.7
NUP54-205ENST00000507257 FAM129AQ9BZQ8 928 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 CCDC87Q9NVE4 849 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 STXBP5LQ9Y2K9 1186 aa19.41■□□□□ 0.7
NUP54-205ENST00000507257 ASAP2O43150 1006 aa19.4■□□□□ 0.7
NUP54-205ENST00000507257 ZPR1O75312 459 aa19.4■□□□□ 0.7
NUP54-205ENST00000507257 TXKP42681 527 aa19.4■□□□□ 0.7
NUP54-205ENST00000507257 FAM26FQ5R3K3 315 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms