RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 CELF2O95319 508 aaKnown RBP9.79□□□□□ -0.84
PFDN1-202ENST00000507185 POLR2BP30876 1174 aaKnown RBP9.79□□□□□ -0.84
PFDN1-202ENST00000507185 DNAJA1P31689 397 aaKnown RBP9.79□□□□□ -0.84
PFDN1-202ENST00000507185 CLCQ05315 142 aa9.79□□□□□ -0.84
PFDN1-202ENST00000507185 NBPF12Q5TAG4 269 aaPredicted RBP9.79□□□□□ -0.84
PFDN1-202ENST00000507185 NIM1KQ8IY84 436 aa9.79□□□□□ -0.84
PFDN1-202ENST00000507185 SYTL5Q8TDW5 730 aaPredicted RBP9.79□□□□□ -0.84
PFDN1-202ENST00000507185 RTF1Q92541 710 aaKnown RBP9.79□□□□□ -0.84
PFDN1-202ENST00000507185 ATG4CQ96DT6 458 aa9.79□□□□□ -0.84
PFDN1-202ENST00000507185 TOX2Q96NM4 488 aa9.79□□□□□ -0.84
PFDN1-202ENST00000507185 MCOLN1Q9GZU1 580 aa9.79□□□□□ -0.84
PFDN1-202ENST00000507185 AFDNP55196 1824 aaKnown RBP9.79□□□□□ -0.84
PFDN1-202ENST00000507185 NRXN2Q9P2S2 1712 aa9.79□□□□□ -0.84
PFDN1-202ENST00000507185 SNRPA1P09661 255 aaKnown RBP9.78□□□□□ -0.84
PFDN1-202ENST00000507185 TMEM253P0C7T8 217 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 CHRNEQ04844 493 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 GNL2Q13823 731 aaKnown RBP9.78□□□□□ -0.84
PFDN1-202ENST00000507185 NR0B2Q15466 257 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 ZNF394Q53GI3 561 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 CLEC4GQ6UXB4 293 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 NLRC3Q7RTR2 1065 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 NKD1Q969G9 470 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 NT5C1AQ9BXI3 368 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 KCNK12Q9HB15 430 aa9.78□□□□□ -0.84
PFDN1-202ENST00000507185 COL11A2P13942 1736 aaPredicted RBP9.78□□□□□ -0.84
PFDN1-202ENST00000507185 PPIP5K2O43314 1243 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 CLEC3AO75596 197 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 C1QTNF9P0C862 333 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 GPTP24298 496 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 PRKAR2BP31323 418 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 HLFQ16534 295 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 LRRFIP1Q32MZ4 808 aaKnown RBP9.77□□□□□ -0.85
PFDN1-202ENST00000507185 NBPF9Q3BBW0 867 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 RNF111Q6ZNA4 994 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 MCM10Q7L590 875 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 ANKS4BQ8N8V4 417 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 DAGLBQ8NCG7 672 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 GMLQ99445 158 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 HDAC8Q9BY41 377 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 PCDHGB7Q9Y5F8 929 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 DLEC1Q9Y238 1755 aa9.77□□□□□ -0.85
PFDN1-202ENST00000507185 SSU72P8A0A1W2PR75 194 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 RPL10P27635 214 aaKnown RBP9.76□□□□□ -0.85
PFDN1-202ENST00000507185 CCNFP41002 786 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 TIGD5Q53EQ6 642 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 CST9Q5W186 159 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 KIF6Q6ZMV9 814 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 USP50Q70EL3 339 aaPredicted RBP9.76□□□□□ -0.85
PFDN1-202ENST00000507185 TMC3Q7Z5M5 1100 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 KIAA0825Q8IV33 1275 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 ZNF655Q8N720 491 aaPredicted RBP9.76□□□□□ -0.85
PFDN1-202ENST00000507185 RBM17Q96I25 401 aaKnown RBP9.76□□□□□ -0.85
PFDN1-202ENST00000507185 PSMD1Q99460 953 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 SPON2Q9BUD6 331 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 GLIS2Q9BZE0 524 aaPredicted RBP9.76□□□□□ -0.85
PFDN1-202ENST00000507185 NYXQ9GZU5 481 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 SLC6A17Q9H1V8 727 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 CWC22Q9HCG8 908 aaKnown RBP9.76□□□□□ -0.85
PFDN1-202ENST00000507185 INPP5FQ9Y2H2 1132 aa9.76□□□□□ -0.85
PFDN1-202ENST00000507185 SCN11AQ9UI33 1791 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 SCN7AQ01118 1682 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 SOX10P56693 466 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 PCBP3P57721 371 aaKnown RBP9.75□□□□□ -0.85
PFDN1-202ENST00000507185 RACK1P63244 317 aaKnown RBP9.75□□□□□ -0.85
PFDN1-202ENST00000507185 DCTN1Q14203 1278 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 CIAPIN1Q6FI81 312 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 NOP9Q86U38 636 aaKnown RBP9.75□□□□□ -0.85
PFDN1-202ENST00000507185 SLITRK4Q8IW52 837 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 LINC01599Q8WXQ3 324 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 TCTN2Q96GX1 697 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 PHACTR3Q96KR7 559 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 ANTXR1Q9H6X2 564 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 MIS18AQ9NYP9 233 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 EBF1Q9UH73 591 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 GPR160Q9UJ42 338 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 ZMYM5Q9UJ78 669 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 DDX41Q9UJV9 622 aaKnown RBP9.75□□□□□ -0.85
PFDN1-202ENST00000507185 RRP7AQ9Y3A4 280 aaKnown RBP9.75□□□□□ -0.85
PFDN1-202ENST00000507185 SLX4Q8IY92 1834 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 ABCC12Q96J65 1359 aa9.75□□□□□ -0.85
PFDN1-202ENST00000507185 ANKRD62A6NC57 917 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 CA12O43570 354 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 U2AF1L5P0DN76 240 aaPredicted RBP9.74□□□□□ -0.85
PFDN1-202ENST00000507185 MYL6BP14649 208 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 NME1P15531 152 aaKnown RBP9.74□□□□□ -0.85
PFDN1-202ENST00000507185 MAP2K2P36507 400 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 GMPSP49915 693 aaPredicted RBP9.74□□□□□ -0.85
PFDN1-202ENST00000507185 U2AF1Q01081 240 aaKnown RBP eCLIP9.74□□□□□ -0.85
PFDN1-202ENST00000507185 SNX17Q15036 470 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 CCDC144BQ3MJ40 725 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 ZSCAN18Q8TBC5 510 aaPredicted RBP9.74□□□□□ -0.85
PFDN1-202ENST00000507185 KCNN1Q92952 543 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 EAF1Q96JC9 268 aaPredicted RBP9.74□□□□□ -0.85
PFDN1-202ENST00000507185 ZNF512BQ96KM6 892 aaPredicted RBP9.74□□□□□ -0.85
PFDN1-202ENST00000507185 CFAP53Q96M91 514 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 FOXP3Q9BZS1 431 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 ADARB2Q9NS39 739 aaKnown RBP9.74□□□□□ -0.85
PFDN1-202ENST00000507185 TCFL5Q9UL49 500 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 ANKRD31Q8N7Z5 1873 aa9.74□□□□□ -0.85
PFDN1-202ENST00000507185 KLRG2A4D1S0 409 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms