RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 SCN5AQ14524 2016 aa20.6■□□□□ 0.89
NPHP4-210ENST00000506941 CCNT1O60563 726 aaKnown RBP20.6■□□□□ 0.89
NPHP4-210ENST00000506941 CD4P01730 458 aa20.6■□□□□ 0.89
NPHP4-210ENST00000506941 SYN1P17600 705 aa20.6■□□□□ 0.89
NPHP4-210ENST00000506941 ACTR2P61160 394 aa20.6■□□□□ 0.89
NPHP4-210ENST00000506941 KIAA0753Q2KHM9 967 aa20.6■□□□□ 0.89
NPHP4-210ENST00000506941 UTP14CQ5TAP6 766 aaKnown RBP20.6■□□□□ 0.89
NPHP4-210ENST00000506941 PPP4R3AQ6IN85 833 aa20.6■□□□□ 0.89
NPHP4-210ENST00000506941 NFRKBQ6P4R8 1299 aa20.6■□□□□ 0.89
NPHP4-210ENST00000506941 SEPT1Q8WYJ6 367 aa20.6■□□□□ 0.89
NPHP4-210ENST00000506941 DCDC2CA8MYV0 355 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 H3BRB1 525 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 B4GALT4O60513 344 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 CLTBP09497 229 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 PCYT2Q99447 389 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 KATNAL1Q9BW62 490 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 SEZ6LQ9BYH1 1024 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 TRPV6Q9H1D0 765 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 TUT1Q9H6E5 874 aaKnown RBP20.59■□□□□ 0.89
NPHP4-210ENST00000506941 TBC1D22BQ9NU19 505 aa20.59■□□□□ 0.89
NPHP4-210ENST00000506941 EVPLQ92817 2033 aa20.58■□□□□ 0.89
NPHP4-210ENST00000506941 TRIM43BA6NCK2 446 aa20.58■□□□□ 0.89
NPHP4-210ENST00000506941 ATG7O95352 703 aa20.58■□□□□ 0.89
NPHP4-210ENST00000506941 GCFC2P16383 781 aaKnown RBP20.58■□□□□ 0.89
NPHP4-210ENST00000506941 U2AF2P26368 475 aaKnown RBP eCLIP20.58■□□□□ 0.89
NPHP4-210ENST00000506941 FAM47CQ5HY64 1035 aa20.58■□□□□ 0.89
NPHP4-210ENST00000506941 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
NPHP4-210ENST00000506941 NOSTRINQ8IVI9 506 aa20.58■□□□□ 0.89
NPHP4-210ENST00000506941 TRIM43Q96BQ3 446 aaPredicted RBP20.58■□□□□ 0.89
NPHP4-210ENST00000506941 INTS4Q96HW7 963 aaKnown RBP20.58■□□□□ 0.89
NPHP4-210ENST00000506941 KCNMB3Q9NPA1 279 aa20.58■□□□□ 0.89
NPHP4-210ENST00000506941 PRDM5Q9NQX1 630 aaPredicted RBP20.58■□□□□ 0.89
NPHP4-210ENST00000506941 FOXD4L1Q9NU39 408 aa20.58■□□□□ 0.89
NPHP4-210ENST00000506941 TRMT13Q9NUP7 481 aaKnown RBP20.58■□□□□ 0.89
NPHP4-210ENST00000506941 EMSYQ7Z589 1322 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 LGR5O75473 907 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 PSMD10O75832 226 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 HIC1Q14526 733 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 LRCH2Q5VUJ6 765 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 ABHD15Q6UXT9 468 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 SESTD1Q86VW0 696 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 HSCBQ8IWL3 235 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 RIT2Q99578 217 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 HDAC6Q9UBN7 1215 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 TBX21Q9UL17 535 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 LOXHD1Q8IVV2 1947 aa20.57■□□□□ 0.88
NPHP4-210ENST00000506941 SIP14410 1827 aa20.56■□□□□ 0.88
NPHP4-210ENST00000506941 ARID2Q68CP9 1835 aa20.56■□□□□ 0.88
NPHP4-210ENST00000506941 GAS7O60861 476 aa20.56■□□□□ 0.88
NPHP4-210ENST00000506941 ITGB8P26012 769 aa20.56■□□□□ 0.88
NPHP4-210ENST00000506941 PTPN11Q06124 597 aaPredicted RBP20.56■□□□□ 0.88
NPHP4-210ENST00000506941 GNL2Q13823 731 aaKnown RBP20.56■□□□□ 0.88
NPHP4-210ENST00000506941 LARP1BQ659C4 914 aaKnown RBP20.56■□□□□ 0.88
NPHP4-210ENST00000506941 GDF6Q6KF10 455 aaPredicted RBP20.56■□□□□ 0.88
NPHP4-210ENST00000506941 ZNF746Q6NUN9 644 aaPredicted RBP20.56■□□□□ 0.88
NPHP4-210ENST00000506941 HAS1Q92839 578 aa20.56■□□□□ 0.88
NPHP4-210ENST00000506941 CTAGE1Q96RT6 745 aa20.56■□□□□ 0.88
NPHP4-210ENST00000506941 NAP1L4Q99733 375 aaKnown RBP20.56■□□□□ 0.88
NPHP4-210ENST00000506941 TMEM39AQ9NV64 488 aa20.56■□□□□ 0.88
NPHP4-210ENST00000506941 GTF2IRD1Q9UHL9 959 aa20.56■□□□□ 0.88
NPHP4-210ENST00000506941 IGKV6D-21A0A0A0MT36 114 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 H3BQV1 296 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 KIAA0355O15063 1070 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 TLR3O15455 904 aaKnown RBP20.55■□□□□ 0.88
NPHP4-210ENST00000506941 SUPT20HL2P0C7V6 817 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 ATP2B1P20020 1258 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 KRT76Q01546 638 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 PRPF38BQ5VTL8 546 aaKnown RBP20.55■□□□□ 0.88
NPHP4-210ENST00000506941 B3GNT9Q6UX72 402 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 CCDC60Q8IWA6 550 aaPredicted RBP20.55■□□□□ 0.88
NPHP4-210ENST00000506941 C7orf31Q8N865 590 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 TEKT3Q9BXF9 490 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 UNC45AQ9H3U1 944 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 RNPEPQ9H4A4 650 aa20.55■□□□□ 0.88
NPHP4-210ENST00000506941 ZNF215Q9UL58 517 aaPredicted RBP20.55■□□□□ 0.88
NPHP4-210ENST00000506941 LAMA2P24043 3122 aaKnown RBP20.55■□□□□ 0.88
NPHP4-210ENST00000506941 CHMP2AO43633 222 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 SMIM10L2AP0DMW4 78 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 SMIM10L2BP0DMW5 78 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 MARK3P27448 753 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 HOXC8P31273 242 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 ZNF200P98182 395 aaPredicted RBP20.54■□□□□ 0.88
NPHP4-210ENST00000506941 MCTP1Q6DN14 999 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 SMAP1Q8IYB5 467 aaPredicted RBP20.54■□□□□ 0.88
NPHP4-210ENST00000506941 GLG1Q92896 1179 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 SMARCAD1Q9H4L7 1026 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 VAV3Q9UKW4 847 aa20.54■□□□□ 0.88
NPHP4-210ENST00000506941 TBX3O15119 743 aa20.53■□□□□ 0.88
NPHP4-210ENST00000506941 CYP2C9P11712 490 aa20.53■□□□□ 0.88
NPHP4-210ENST00000506941 TOB1P50616 345 aaPredicted RBP20.53■□□□□ 0.88
NPHP4-210ENST00000506941 NBR1Q14596 966 aa20.53■□□□□ 0.88
NPHP4-210ENST00000506941 MIS18BP1Q6P0N0 1132 aa20.53■□□□□ 0.88
NPHP4-210ENST00000506941 FAM20AQ96MK3 541 aa20.53■□□□□ 0.88
NPHP4-210ENST00000506941 ERAP1Q9NZ08 941 aa20.53■□□□□ 0.88
NPHP4-210ENST00000506941 PRKAG2Q9UGJ0 569 aa20.53■□□□□ 0.88
NPHP4-210ENST00000506941 WDR64B1ANS9 1081 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 NEMFO60524 1076 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 MCM7P33993 719 aa20.52■□□□□ 0.88
NPHP4-210ENST00000506941 MAGEA10P43363 369 aaPredicted RBP20.52■□□□□ 0.88
NPHP4-210ENST00000506941 STAT5BP51692 787 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms