RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 PCDHA2Q9Y5H9 948 aa4.24□□□□□ -1.73
TOPBP1-205ENST00000506779 H7BY64 318 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 INO80B-WBP1J3KQ70 363 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 DGKIO75912 1065 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 CPP00450 1065 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 LTBRP36941 435 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 CYP4F3Q08477 520 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 LSAMPQ13449 338 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 PRSS53Q2L4Q9 553 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 ACBD5Q5T8D3 534 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 TRMT10BQ6PF06 316 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 TEPPQ6URK8 271 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 ARRDC4Q8NCT1 418 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 RCBTB1Q8NDN9 531 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 YTHDC1Q96MU7 727 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 INO80BQ9C086 356 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 EPB41L1Q9H4G0 881 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 CAPN10Q9HC96 672 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 MYOTQ9UBF9 498 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 FBXL7Q9UJT9 491 aa4.23□□□□□ -1.73
TOPBP1-205ENST00000506779 TCRBV5S2A0A599 114 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 B2RBV5 119 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 SMAD7O15105 426 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 SUSD5O60279 629 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 MAFKO60675 156 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 SCG5P05408 212 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 SSBP05455 408 aaKnown RBP eCLIP4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 ATF4P18848 351 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 IL13P35225 146 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 COL10A1Q03692 680 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 TNNI3KQ59H18 835 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 TMC5Q6UXY8 1006 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 FAM178BQ8IXR5 827 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 KBTBD2Q8IY47 623 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 SLC43A3Q8NBI5 491 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 MBD6Q96DN6 1003 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 CCDC140Q96MF4 163 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 ADOQ96SZ5 270 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 GMLQ99445 158 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 BARX1Q9HBU1 254 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 MRVI1Q9Y6F6 885 aa4.22□□□□□ -1.73
TOPBP1-205ENST00000506779 KRIT1O00522 736 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 DDAH1O94760 285 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 ADH4P08319 380 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 LCP1P13796 627 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 MLLT6P55198 1093 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 SF1Q15637 639 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 NAALADL2Q58DX5 795 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 EMC4Q5J8M3 183 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 MCF2L2Q86YR7 1114 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 KLHL36Q8N4N3 616 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 TMEM145Q8NBT3 493 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 PHOSPHO1Q8TCT1 267 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 ZCCHC14Q8WYQ9 949 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
TOPBP1-205ENST00000506779 AGRPO00253 132 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 U2SURPO15042 1029 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 RAMP2O60895 175 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 GFRA1P56159 465 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 VASNQ6EMK4 673 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 PKN3Q6P5Z2 889 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 ZNF627Q7L945 461 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 KREMEN2Q8NCW0 462 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 MEGF9Q9H1U4 602 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 ZDHHC9Q9Y397 364 aa4.2□□□□□ -1.74
TOPBP1-205ENST00000506779 B4GALT4O60513 344 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 TADA3O75528 432 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 FBXO21O94952 628 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 LRG1P02750 347 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 NFATC3Q12968 1075 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 TESK1Q15569 626 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 FXNQ16595 210 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 RALYLQ86SE5 291 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 VPS37DQ86XT2 251 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 TRIM48Q8IWZ4 208 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 SMOC1Q9H4F8 434 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 MMRN2Q9H8L6 949 aa4.19□□□□□ -1.74
TOPBP1-205ENST00000506779 MASP2O00187 686 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 ARNTLO00327 626 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 C1SP09871 688 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 GRIN1Q05586 938 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 GNL2Q13823 731 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 FNDC7Q5VTL7 733 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 CYP4F22Q6NT55 531 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 EEPD1Q7L9B9 569 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 IFNL2Q8IZJ0 200 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 KCTD13Q8WZ19 329 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 RBPJLQ9UBG7 517 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 ASH2LQ9UBL3 628 aa4.18□□□□□ -1.74
TOPBP1-205ENST00000506779 SLC27A2O14975 620 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 FOXS1O43638 330 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 DNAJA1P31689 397 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 C21orf58P58505 322 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 ARID5AQ03989 594 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 ZNF568Q3ZCX4 644 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 PHF19Q5T6S3 580 aa4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 MRM1Q6IN84 353 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-205ENST00000506779 DENND5AQ6IQ26 1287 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms