RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 IARSP41252 1262 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 KIR2DL1P43626 348 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 KIR2DL2P43627 348 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 RECQLP46063 649 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PHC1P78364 1004 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PRKCQQ04759 706 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 DUSP4Q13115 394 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 TERF2Q15554 542 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 AOC3Q16853 763 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 GFOD2Q3B7J2 385 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 HABP4Q5JVS0 413 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 GPR158Q5T848 1215 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 MROH9Q5TGP6 573 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 CXorf57Q6NSI4 855 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 OTOP3Q7RTS5 596 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PNMA8AQ86V59 439 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 RASSF3Q86WH2 238 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PTRH1Q86Y79 214 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 TEX2Q8IWB9 1127 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 NLGN4XQ8N0W4 816 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 KIAA1958Q8N8K9 716 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 USP33Q8TEY7 942 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 FAXDC2Q96IV6 333 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 MAP6Q96JE9 813 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 RHOBTB2Q9BYZ6 727 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PCIF1Q9H4Z3 704 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 TCF7L1Q9HCS4 588 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 ACSS2Q9NR19 701 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 TOMM22Q9NS69 142 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 C14orf119Q9NWQ9 140 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 MKS1Q9NXB0 559 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 LMCD1Q9NZU5 365 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 ZC3H7BQ9UGR2 993 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 ANKRD6Q9Y2G4 727 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 MRC2Q9UBG0 1479 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 WIZO95785 1651 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PDS5BQ9NTI5 1447 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 TCRBV5S4A2TA0A5A2 114 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 GOLGA8AA7E2F4 631 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 GOLGA8BA8MQT2 603 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 KIAA1324LA8MWY0 1029 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 NKRFO15226 690 aaKnown RBP eCLIP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 MAFKO60675 156 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 PPP1R11O60927 126 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 CYP17A1P05093 508 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 RBP3P10745 1247 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 VCAM1P19320 739 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 FPR2P25090 351 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 CORO7P57737 925 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 KRT85P78386 507 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 SMAD3P84022 425 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 PCBP2Q15366 365 aaKnown RBP eCLIP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 SMAD2Q15796 467 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 MAP9Q49MG5 647 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 ANGEL2Q5VTE6 544 aaKnown RBP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 CERS3Q8IU89 383 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 RIOX2Q8IUF8 465 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 ZDHHC13Q8IUH4 622 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 AMOTL1Q8IY63 956 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 ZZZ3Q8IYH5 903 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 CPA6Q8N4T0 437 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 LZTR1Q8N653 840 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 MAGEB6Q8N7X4 407 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 ZNF610Q8N9Z0 462 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 C1orf162Q8NEQ5 155 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 PIP4K2CQ8TBX8 421 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 PLEKHO2Q8TD55 490 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 MISP3Q96FF7 219 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 HHIPL1Q96JK4 782 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 JMJD8Q96S16 334 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 ELF4Q99607 663 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 MTA3Q9BTC8 594 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 MYH16Q9H6N6 1097 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 SLC6A20Q9NP91 592 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 DSEQ9UL01 958 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 PNMA8BQ9ULN7 279 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 GIT1Q9Y2X7 761 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 RWDD3Q9Y3V2 267 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 RIPOR2Q9Y4F9 1068 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 WDR62O43379 1518 aa4.2□□□□□ -1.74
TRAPPC11-205ENST00000506426 KLHL33A6NCF5 533 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 MAN2B1O00754 1011 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 SCDO00767 359 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 DVL2O14641 736 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 KCNK3O14649 394 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 CLASP2O75122 1294 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 MYL1P05976 194 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 CD40P25942 277 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 CEBPAP49715 358 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 KIF11P52732 1056 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 SCAND1P57086 179 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 RTP1P59025 263 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 IKZF1Q13422 519 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 TCIRG1Q13488 830 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 HDAC1Q13547 482 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 LRRC32Q14392 662 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 CHRNA2Q15822 529 aa4.19□□□□□ -1.74
TRAPPC11-205ENST00000506426 SLC14A2Q15849 920 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms