RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 PAK6Q9NQU5 681 aaPredicted RBP12.61□□□□□ -0.39
TRIM23-205ENST00000506400 FBXO2Q9UK22 296 aaPredicted RBP12.61□□□□□ -0.39
TRIM23-205ENST00000506400 SAMM50Q9Y512 469 aa12.61□□□□□ -0.39
TRIM23-205ENST00000506400 A6NJR5 290 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 WDR64B1ANS9 1081 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 ZEB2O60315 1214 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 SORBS3O60504 671 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 KPNA6O60684 536 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 PPFIA4O75335 1185 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 PSAPP07602 524 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
TRIM23-205ENST00000506400 ACTR2P61160 394 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 SP4Q02446 784 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 SPIRE1Q08AE8 756 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 EPHA7Q15375 998 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 IL17AQ16552 155 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 LHX8Q68G74 356 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 NCAPH2Q6IBW4 605 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 MIS18BP1Q6P0N0 1132 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 RNF180Q86T96 592 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 IGSF22Q8N9C0 903 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
TRIM23-205ENST00000506400 ERMNQ8TAM6 284 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 NEK9Q8TD19 979 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 CHAMP1Q96JM3 812 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 GPR20Q99678 358 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 DISC1Q9NRI5 854 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 LRWD1Q9UFC0 647 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 PCDHA10Q9Y5I2 948 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 SYNRGQ9UMZ2 1314 aa12.6□□□□□ -0.39
TRIM23-205ENST00000506400 DOCK3Q8IZD9 2030 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 GSTTP1A0A1W2PQM5 241 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 SLC26A4O43511 780 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 CHMP2AO43633 222 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 DKC1O60832 514 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIM23-205ENST00000506400 ADAMTS4O75173 837 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 CCNE2O96020 404 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 PGK1P00558 417 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 GJB1P08034 283 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 SUPT20HL2P0C7V6 817 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 KCNA4P22459 653 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 CST5P28325 142 aaPredicted RBP12.59□□□□□ -0.39
TRIM23-205ENST00000506400 TCF7P36402 384 aaPredicted RBP12.59□□□□□ -0.39
TRIM23-205ENST00000506400 FSCN1Q16658 493 aaKnown RBP12.59□□□□□ -0.39
TRIM23-205ENST00000506400 DGKDQ16760 1214 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 GNASQ5JWF2 1037 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 HAUS3Q68CZ6 603 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 ABHD15Q6UXT9 468 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 ARRDC4Q8NCT1 418 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
TRIM23-205ENST00000506400 CSRNP2Q9H175 543 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 PCDHA7Q9UN72 937 aa12.59□□□□□ -0.39
TRIM23-205ENST00000506400 KIAA1217Q5T5P2 1943 aa12.58□□□□□ -0.39
TRIM23-205ENST00000506400 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 POTEMA6NI47 508 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 EML1O00423 815 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
TRIM23-205ENST00000506400 MMP3P08254 477 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 HOXD8P13378 290 aaPredicted RBP12.58□□□□□ -0.4
TRIM23-205ENST00000506400 TXLNAP40222 546 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 UBA7P41226 1012 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 FAM160B1Q5W0V3 765 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 KRT79Q5XKE5 535 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 ADALQ6DHV7 355 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 PCSK9Q8NBP7 692 aaKnown RBP12.58□□□□□ -0.4
TRIM23-205ENST00000506400 KLHDC9Q8NEP7 349 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 DEFB118Q96PH6 123 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 EIF2AK1Q9BQI3 630 aaKnown RBP12.58□□□□□ -0.4
TRIM23-205ENST00000506400 TMEM106CQ9BVX2 250 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 AZI2Q9H6S1 392 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 TUFT1Q9NNX1 390 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 OGDHLQ9ULD0 1010 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 MYH15Q9Y2K3 1946 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 EMSYQ7Z589 1322 aa12.58□□□□□ -0.4
TRIM23-205ENST00000506400 IGKV6D-21A0A0A0MT36 114 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 GOLGA6L4A6NEF3 574 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 GOLGA6L22H0YM25 854 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 BACH1O14867 736 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 CTAGE5O15320 804 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 LGR5O75473 907 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 SGPL1O95470 568 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 P4HBP07237 508 aaKnown RBP12.57□□□□□ -0.4
TRIM23-205ENST00000506400 MUTP22033 750 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 PTGS1P23219 599 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 RPA1P27694 616 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 SLC26A2P50443 739 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 GRIN1Q05586 938 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 LRRC41Q15345 812 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 AXDND1Q5T1B0 1012 aaPredicted RBP12.57□□□□□ -0.4
TRIM23-205ENST00000506400 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
TRIM23-205ENST00000506400 SWSAP1Q6NVH7 229 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 TMEM87AQ8NBN3 555 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 AFAP1L1Q8TED9 768 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 SNX29Q8TEQ0 813 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 ATP6V0A1Q93050 837 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 CLIC6Q96NY7 704 aa12.57□□□□□ -0.4
TRIM23-205ENST00000506400 TSEN34Q9BSV6 310 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms