RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 KCNH2Q12809 1159 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 KIAA0753Q2KHM9 967 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 USH1GQ495M9 461 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 CFAP221Q4G0U5 840 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 C8orf74Q6P047 294 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 TRIM59Q8IWR1 403 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 SP8Q8IXZ3 490 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 C10orf67Q8IYJ2 551 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 RNF10Q8N5U6 811 aaKnown RBP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 NUCKS1Q9H1E3 243 aaKnown RBP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 KCTD10Q9H3F6 313 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 KCNQ5Q9NR82 932 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 STIM2Q9P246 746 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 GOLGA6CA6NDK9 693 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 GNA14O95837 355 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 GOLGA6DP0CG33 693 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 ACTN1P12814 892 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 NR2F2P24468 414 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 KLRC1P26715 233 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 USP11P51784 963 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 RBM5P52756 815 aaKnown RBP eCLIP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 ITIH3Q06033 890 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 IKQ13123 557 aaPredicted RBP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 PABPC4Q13310 644 aaKnown RBP eCLIP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 CDC37Q16543 378 aaPredicted RBP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 HAUS3Q68CZ6 603 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 APOBEC3HQ6NTF7 200 aaKnown RBP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 ZNF572Q7Z3I7 529 aaPredicted RBP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 CATSPER3Q86XQ3 398 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 IFT81Q8WYA0 676 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 TEKT1Q969V4 418 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 PACSIN1Q9BY11 444 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 ANO3Q9BYT9 981 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 GOLGA6AQ9NYA3 693 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 RRP15Q9Y3B9 282 aaKnown RBP8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 PCDHAC2Q9Y5I4 1007 aa8.39□□□□□ -1.07
PPARGC1A-204ENST00000506055 MYH10P35580 1976 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 ESYT3A0FGR9 886 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 RBAK-RBAKDNI3L0D1 243 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 MYO1CO00159 1063 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 POLRMTO00411 1230 aaKnown RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 CETN3O15182 167 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 NAB2Q15742 525 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 SLC18A3Q16572 532 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 HYIQ5T013 277 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 SLFN13Q68D06 897 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 DNAAF5Q86Y56 855 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 FAM76AQ8TAV0 307 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 SYN2Q92777 582 aaPredicted RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 KCNMB3Q9NPA1 279 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 LUC7LQ9NQ29 371 aaKnown RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 TAF1LQ8IZX4 1826 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 ZSCAN5CA6NGD5 496 aaPredicted RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 ANKRD65E5RJM6 399 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 UBAP1LF5GYI3 381 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 MEIS2O14770 477 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 GLI1P08151 1106 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 TAL1P17542 331 aaPredicted RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 SLC9A1P19634 815 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 HOXA7P31268 230 aaPredicted RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 EPHB4P54760 987 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 SLC12A3P55017 1021 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 ARHGAP4P98171 946 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 CYP4A11Q02928 519 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 ASIC2Q16515 512 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 PTPROQ16827 1216 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 CERKLQ49MI3 558 aaPredicted RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 DNAJC21Q5F1R6 531 aaKnown RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 FOXR2Q6PJQ5 311 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 SRLQ86TD4 932 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 KIAA0825Q8IV33 1275 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 SLFN12Q8IYM2 578 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 GJD4Q96KN9 370 aaPredicted RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 NAP1L4Q99733 375 aaKnown RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 DHX36Q9H2U1 1008 aaKnown RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 DNAJC18Q9H819 358 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 FEZ2Q9UHY8 353 aaPredicted RBP8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 HDAC9Q9UKV0 1011 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 DNM3Q9UQ16 869 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
PPARGC1A-204ENST00000506055 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 DDTLA6NHG4 134 aaPredicted RBP8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 RPS6KA5O75582 802 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 GUCY2DQ02846 1103 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 PTK2Q05397 1052 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 GIT2Q14161 759 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 DCAF17Q5H9S7 520 aaPredicted RBP8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 TCERG1LQ5VWI1 586 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 TTC19Q6DKK2 380 aaPredicted RBP8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 ARHGAP27Q6ZUM4 889 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 TSEN2Q8NCE0 465 aaKnown RBP8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 SPAG5Q96R06 1193 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 RUFY1Q96T51 708 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 P2RX7Q99572 595 aaKnown RBP8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 REEP2Q9BRK0 252 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 RABEP2Q9H5N1 569 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 DBNDD1Q9H9R9 158 aa8.37□□□□□ -1.07
PPARGC1A-204ENST00000506055 EPB41L5Q9HCM4 733 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms