RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 LINC01553A4QN01 128 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 ADD1P35611 737 aaKnown RBP12.26□□□□□ -0.45
CPNE4-206ENST00000505957 CHMP4BP1P59074 171 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 PTK7Q13308 1070 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 IKBKEQ14164 716 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 FOXD4L5Q5VV16 416 aaPredicted RBP12.26□□□□□ -0.45
CPNE4-206ENST00000505957 SEPT14Q6ZU15 432 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 TMCO2Q7Z6W1 182 aaPredicted RBP12.26□□□□□ -0.45
CPNE4-206ENST00000505957 CATIPQ7Z7H3 387 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 MCF2L2Q86YR7 1114 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 C7orf31Q8N865 590 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 FANCBQ8NB91 859 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 SYTL5Q8TDW5 730 aaPredicted RBP12.26□□□□□ -0.45
CPNE4-206ENST00000505957 FOXD4L4Q8WXT5 416 aaPredicted RBP12.26□□□□□ -0.45
CPNE4-206ENST00000505957 TAAR1Q96RJ0 339 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 RNF26Q9BY78 433 aaPredicted RBP12.26□□□□□ -0.45
CPNE4-206ENST00000505957 CD320Q9NPF0 282 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 HDAC6Q9UBN7 1215 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 DDX41Q9UJV9 622 aaKnown RBP12.26□□□□□ -0.45
CPNE4-206ENST00000505957 ABCB11O95342 1321 aa12.26□□□□□ -0.45
CPNE4-206ENST00000505957 PIEZO1Q92508 2521 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 PRR33A8MZF0 331 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 HAS3O00219 553 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 EIF3JO75822 258 aaKnown RBP12.25□□□□□ -0.45
CPNE4-206ENST00000505957 F2P00734 622 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 HOXD8P13378 290 aaPredicted RBP12.25□□□□□ -0.45
CPNE4-206ENST00000505957 PSEN2P49810 448 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 LAMC2Q13753 1193 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 GSE1Q14687 1217 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 TCTN1Q2MV58 587 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 TRIM71Q2Q1W2 868 aaKnown RBP12.25□□□□□ -0.45
CPNE4-206ENST00000505957 USH1GQ495M9 461 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 TRAF7Q6Q0C0 670 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 BRAPQ7Z569 592 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 FAM178BQ8IXR5 827 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 GJD3Q8N144 294 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 PPTC7Q8NI37 304 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 TBC1D5Q92609 795 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 C8orf76Q96K31 380 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 RMDN3Q96TC7 470 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 ZKSCAN3Q9BRR0 538 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
CPNE4-206ENST00000505957 INSL6Q9Y581 213 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 BRWD1Q9NSI6 2320 aa12.25□□□□□ -0.45
CPNE4-206ENST00000505957 PRPF40AO75400 957 aaKnown RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 LGR5O75473 907 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 DEXIO95424 95 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 UBE2HP62256 183 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 DNM1Q05193 864 aaKnown RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 SSRP1Q08945 709 aaKnown RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 FUT2Q10981 343 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 MFSD10Q14728 455 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 CDC37Q16543 378 aaPredicted RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 PUS10Q3MIT2 529 aaKnown RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 EMSYQ7Z589 1322 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 TRIM22Q8IYM9 498 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 FAM177A1Q8N128 213 aaPredicted RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 COL20A1Q9P218 1284 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 MTUS1Q9ULD2 1270 aa12.24□□□□□ -0.45
CPNE4-206ENST00000505957 MRPL11Q9Y3B7 192 aaKnown RBP12.24□□□□□ -0.45
CPNE4-206ENST00000505957 FAM86C2PA6NEL3 165 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 PPFIA4O75335 1185 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 GOLGA8HP0CJ92 632 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 ALADP13716 330 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 HTRA4P83105 476 aaPredicted RBP12.23□□□□□ -0.45
CPNE4-206ENST00000505957 MBTPS1Q14703 1052 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 KIAA0753Q2KHM9 967 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 ZNF618Q5T7W0 954 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 ARHGEF16Q5VV41 709 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 TMTC3Q6ZXV5 915 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 ADGRF4Q8IZF3 695 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 FBXO22Q8NEZ5 403 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
CPNE4-206ENST00000505957 MRPL38Q96DV4 380 aaKnown RBP12.23□□□□□ -0.45
CPNE4-206ENST00000505957 SAMD11Q96NU1 681 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 UBA5Q9GZZ9 404 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 CFAP45Q9UL16 551 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 MRVI1Q9Y6F6 885 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 TRIP12Q14669 1992 aaPredicted RBP12.23□□□□□ -0.45
CPNE4-206ENST00000505957 MYH15Q9Y2K3 1946 aa12.23□□□□□ -0.45
CPNE4-206ENST00000505957 PTPRSQ13332 1948 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 GRXCR2A6NFK2 248 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 PRPF3O43395 683 aaKnown RBP12.22□□□□□ -0.45
CPNE4-206ENST00000505957 AMHP03971 560 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 NR3C2P08235 984 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
CPNE4-206ENST00000505957 RXRAP19793 462 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 KCNA5P22460 613 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 KIF5BP33176 963 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 GNAQP50148 359 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 GHRHRQ02643 423 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 PTPROQ16827 1216 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 KCNV1Q6PIU1 500 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
CPNE4-206ENST00000505957 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms