RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
NFKB1-205ENST00000505458 MIGA2Q7L4E1 593 aa12.54□□□□□ -0.4
NFKB1-205ENST00000505458 MXRA8Q9BRK3 442 aa12.54□□□□□ -0.4
NFKB1-205ENST00000505458 LUC7LQ9NQ29 371 aaKnown RBP12.54□□□□□ -0.4
NFKB1-205ENST00000505458 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
NFKB1-205ENST00000505458 TRAF3IP3Q9Y228 551 aa12.54□□□□□ -0.4
NFKB1-205ENST00000505458 PCDHA2Q9Y5H9 948 aa12.54□□□□□ -0.4
NFKB1-205ENST00000505458 MYPNQ86TC9 1320 aa12.54□□□□□ -0.4
NFKB1-205ENST00000505458 SOWAHDA6NJG2 315 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 OTOP1Q7RTM1 612 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 FMNL3Q8IVF7 1028 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 SLC17A8Q8NDX2 589 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 SYN2Q92777 582 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-205ENST00000505458 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 EPN1Q9Y6I3 576 aaPredicted RBP12.53□□□□□ -0.4
NFKB1-205ENST00000505458 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 TRAF5O00463 557 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 SNAP25P60880 206 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 KIAA1755Q5JYT7 1200 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 POTEGQ6S5H5 508 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 RAD9BQ6WBX8 426 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 RDM1Q8NG50 284 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 HSD17B14Q9BPX1 270 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 CNOT7Q9UIV1 285 aaKnown RBP12.53□□□□□ -0.4
NFKB1-205ENST00000505458 BCS1LQ9Y276 419 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 NDUFA10O95299 355 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 GOLGA8FQ08AF8 430 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 GOLGA8DPQ0D2H9 430 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 GIT2Q14161 759 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 FRMD5Q7Z6J6 570 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 P2RX7Q99572 595 aaKnown RBP12.53□□□□□ -0.4
NFKB1-205ENST00000505458 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
NFKB1-205ENST00000505458 PPP1R12BO60237 982 aaPredicted RBP12.52□□□□□ -0.4
NFKB1-205ENST00000505458 NEK11Q8NG66 645 aa12.52□□□□□ -0.4
NFKB1-205ENST00000505458 TYW1Q9NV66 732 aaKnown RBP12.52□□□□□ -0.4
NFKB1-205ENST00000505458 EIF3CLB5ME19 914 aaKnown RBP12.52□□□□□ -0.41
NFKB1-205ENST00000505458 EIF3CQ99613 913 aaKnown RBP12.52□□□□□ -0.41
NFKB1-205ENST00000505458 HACL1Q9UJ83 578 aa12.52□□□□□ -0.41
NFKB1-205ENST00000505458 EFCAB8A8MWE9 144 aa12.52□□□□□ -0.41
NFKB1-205ENST00000505458 DKC1O60832 514 aaKnown RBP eCLIP12.52□□□□□ -0.41
NFKB1-205ENST00000505458 FAM13AO94988 1023 aa12.52□□□□□ -0.41
NFKB1-205ENST00000505458 MAPTP10636 758 aaKnown RBP12.52□□□□□ -0.41
NFKB1-205ENST00000505458 STAT3P40763 770 aa12.52□□□□□ -0.41
NFKB1-205ENST00000505458 KNOP1Q1ED39 458 aaKnown RBP12.52□□□□□ -0.41
NFKB1-205ENST00000505458 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.41
NFKB1-205ENST00000505458 EPM2AIP1Q7L775 607 aaPredicted RBP12.52□□□□□ -0.41
NFKB1-205ENST00000505458 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
NFKB1-205ENST00000505458 KRT86O43790 486 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 NCBP1Q09161 790 aaKnown RBP12.51□□□□□ -0.41
NFKB1-205ENST00000505458 MYBPC2Q14324 1141 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 TANGO6Q9C0B7 1094 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 KCTD10Q9H3F6 313 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 ARGLU1Q9NWB6 273 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-205ENST00000505458 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 SIK3Q9Y2K2 1263 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 PARP14Q460N5 1801 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 MAFGO15525 162 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 URI1O94763 535 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-205ENST00000505458 LYPLA2O95372 231 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 GUCY2CP25092 1073 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 ANXA13P27216 316 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 EPS15P42566 896 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 ERVK-24P63145 666 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 PABPC4Q13310 644 aaKnown RBP eCLIP12.51□□□□□ -0.412e-10■■■■□ 24.7
NFKB1-205ENST00000505458 B3GNT9Q6UX72 402 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 CEP112Q8N8E3 955 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 SCFD1Q8WVM8 642 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 REEP2Q9BRK0 252 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 MKNK1Q9BUB5 465 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 CEP72Q9P209 647 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 MYO6Q9UM54 1294 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
NFKB1-205ENST00000505458 CTAGE9A4FU28 777 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 IPO5O00410 1097 aaKnown RBP12.51□□□□□ -0.41
NFKB1-205ENST00000505458 STAM2O75886 525 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 SFNP31947 248 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 JAK3P52333 1124 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 SPA17Q15506 151 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 ZYXQ15942 572 aaKnown RBP12.51□□□□□ -0.41
NFKB1-205ENST00000505458 ARSHQ5FYA8 562 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 TRIM59Q8IWR1 403 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 DBR1Q9UK59 544 aaKnown RBP12.51□□□□□ -0.41
NFKB1-205ENST00000505458 ZNF215Q9UL58 517 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-205ENST00000505458 ZNF536O15090 1300 aa12.51□□□□□ -0.41
NFKB1-205ENST00000505458 COBLO75128 1261 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 FLOT1O75955 427 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 TUBBP07437 444 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 BACE1P56817 501 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 SNRPFP62306 86 aaKnown RBP12.5□□□□□ -0.41
NFKB1-205ENST00000505458 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 PARVGQ9HBI0 331 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 UBIAD1Q9Y5Z9 338 aa12.5□□□□□ -0.41
NFKB1-205ENST00000505458 USO1O60763 962 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms