RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 BTNL9Q6UXG8 535 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CTAGE6Q86UF2 777 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 TXNRD3Q86VQ6 643 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 RAB11FIP4Q86YS3 637 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 C2CD5Q86YS7 1000 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CTAGE4Q8IX94 777 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CMTR1Q8N1G2 835 aaKnown RBP7.07□□□□□ -1.28
COPB2-204ENST00000504295 ZNF276Q8N554 614 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 MAB21L3Q8N8X9 362 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 TATDN2Q93075 761 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 OSBPL7Q9BZF2 842 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 RIC8AQ9NPQ8 531 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CYP2D7A0A087X1C5 515 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CCDC189A1A4V9 331 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 SLC16A3O15427 465 aaKnown RBP7.07□□□□□ -1.28
COPB2-204ENST00000504295 USP11P51784 963 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 INHBEP58166 350 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 ZNF844Q08AG5 666 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 DUPD1Q68J44 220 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 PRR5LQ6MZQ0 368 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 SLC9A9Q8IVB4 645 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 C12orf56Q8IXR9 622 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 GLIS3Q8NEA6 775 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CNKSR2Q8WXI2 1034 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 RBM17Q96I25 401 aaKnown RBP7.07□□□□□ -1.28
COPB2-204ENST00000504295 TRPM7Q96QT4 1865 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CRAMP1Q96RY5 1269 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 NUDT12Q9BQG2 462 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 FAM129AQ9BZQ8 928 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 TAB2Q9NYJ8 693 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 TRMT112Q9UI30 125 aaKnown RBP7.07□□□□□ -1.28
COPB2-204ENST00000504295 PLXNA3P51805 1871 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 IGLV3-22A0A075B6J6 115 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 MYO1FO00160 1098 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 MAPK13O15264 365 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 FCER1AP12319 257 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 MUTP22033 750 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 KRT9P35527 623 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 KIF11P52732 1056 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 SMTNP53814 917 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CCDC152Q4G0S7 254 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CCDC178Q5BJE1 867 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 DALRD3Q5D0E6 543 aaKnown RBP7.07□□□□□ -1.28
COPB2-204ENST00000504295 CGB2Q6NT52 195 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 SCFD1Q8WVM8 642 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 MASTLQ96GX5 879 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 DNAJC18Q9H819 358 aa7.07□□□□□ -1.28
COPB2-204ENST00000504295 CNOT8Q9UFF9 292 aaKnown RBP7.07□□□□□ -1.28
COPB2-204ENST00000504295 A0A0U1RQG5 324 aaPredicted RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 SRGAP2O75044 1071 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 PPFIA3O75145 1194 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 CYP2D6P10635 497 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 TCP1P17987 556 aaKnown RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 VCAM1P19320 739 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 DRD4P21917 467 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 IVDP26440 423 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 CLDN10P78369 228 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 KRT83P78385 493 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 MAP3K10Q02779 954 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 CREB5Q02930 508 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 TRDNQ13061 729 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 KIF22Q14807 665 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 GPR162Q16538 588 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 ZC3H12AQ5D1E8 599 aaKnown RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 TMEM63BQ5T3F8 832 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 MMS22LQ6ZRQ5 1243 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 RGS9BPQ6ZS82 235 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 SMIM5Q71RC9 77 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 RPGRQ92834 1020 aaKnown RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 CELF1Q92879 486 aaKnown RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 CCDC34Q96HJ3 373 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 SUCLA2Q9P2R7 463 aaPredicted RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 B4DLN1 442 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 PEX5P50542 639 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 SLC18A1P54219 525 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 ERFEQ4G0M1 354 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 NAA35Q5VZE5 725 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 PPP4R3CPQ6ZMV5 832 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 TMC3Q7Z5M5 1100 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 TRIM22Q8IYM9 498 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 TTLL6Q8N841 843 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 AFAP1L1Q8TED9 768 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 L3MBTL3Q96JM7 780 aaPredicted RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 SLF1Q9BQI6 1058 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 TMEM47Q9BQJ4 181 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 JPH2Q9BR39 696 aaPredicted RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 AAASQ9NRG9 546 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.06□□□□□ -1.28
COPB2-204ENST00000504295 ATP6V0A2Q9Y487 856 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 ANKRD36A6QL64 1941 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 FAM107AO95990 144 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 PDHBP11177 359 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 GCKP35557 465 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 TATDN1Q6P1N9 297 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 ZNF771Q7L3S4 317 aaPredicted RBP7.06□□□□□ -1.28
COPB2-204ENST00000504295 NT5DC3Q86UY8 548 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 ANKS4BQ8N8V4 417 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 WHAMMQ8TF30 809 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 FAM212AQ96EL1 285 aa7.06□□□□□ -1.28
COPB2-204ENST00000504295 BLZF1Q9H2G9 400 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms