RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 TRIM21P19474 475 aaKnown RBP10.85□□□□□ -0.67
COL1A1-210ENST00000504289 RPL13P26373 211 aaKnown RBP10.85□□□□□ -0.67
COL1A1-210ENST00000504289 CYLC1P35663 651 aaPredicted RBP10.85□□□□□ -0.67
COL1A1-210ENST00000504289 STAT3P40763 770 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 BACE1P56817 501 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 SUPT20HL1Q3ZLR7 823 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 RAD9BQ6WBX8 426 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 TOGARAM2Q6ZUX3 1019 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 FRMD5Q7Z6J6 570 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 CDAN1Q8IWY9 1227 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 PDCL2Q8N4E4 241 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 EHBP1Q8NDI1 1231 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 RDM1Q8NG50 284 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 CPLX3Q8WVH0 158 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 CLEC4DQ8WXI8 215 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 SYN2Q92777 582 aaPredicted RBP10.85□□□□□ -0.67
COL1A1-210ENST00000504289 ZNF577Q9BSK1 485 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 TIPINQ9BVW5 301 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 PDCL3Q9H2J4 239 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 KCTD10Q9H3F6 313 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 HAUS4Q9H6D7 363 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 METTL14Q9HCE5 456 aaKnown RBP10.85□□□□□ -0.67
COL1A1-210ENST00000504289 PICK1Q9NRD5 415 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 DAAM1Q9Y4D1 1078 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 CTDP1Q9Y5B0 961 aaPredicted RBP10.85□□□□□ -0.67
COL1A1-210ENST00000504289 UBIAD1Q9Y5Z9 338 aa10.85□□□□□ -0.67
COL1A1-210ENST00000504289 EPN1Q9Y6I3 576 aaPredicted RBP10.85□□□□□ -0.67
COL1A1-210ENST00000504289 SOWAHDA6NJG2 315 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 EIF3CLB5ME19 914 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 IPO5O00410 1097 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 TRAF5O00463 557 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 PES1O00541 588 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 SLC16A3O15427 465 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 CALUO43852 315 aaPredicted RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 SLITRK3O94933 977 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 NDUFA10O95299 355 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 IPO7O95373 1038 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 MAPTP10636 758 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 GUCY2CP25092 1073 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 YY1P25490 414 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 CASQ1P31415 396 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 ZNF131P52739 623 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 GOLGA8FQ08AF8 430 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 GOLGA8DPQ0D2H9 430 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 ALCAMQ13740 583 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 MYBPC2Q14324 1141 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 KNOP1Q1ED39 458 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 CREBRFQ8IUR6 639 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 TRIM59Q8IWR1 403 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 ZNF280CQ8ND82 737 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 GOLGA5Q8TBA6 731 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 TMEM174Q8WUU8 243 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 SCFD1Q8WVM8 642 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 EIF3CQ99613 913 aaKnown RBP10.84□□□□□ -0.67
COL1A1-210ENST00000504289 JADE2Q9NQC1 790 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 FBXO28Q9NVF7 368 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 ADAMTS5Q9UNA0 930 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 PLAGL2Q9UPG8 496 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 SIK3Q9Y2K2 1263 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 DOCK1Q14185 1865 aa10.84□□□□□ -0.67
COL1A1-210ENST00000504289 EML1O00423 815 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 COBLO75128 1261 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 STAM2O75886 525 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 FLOT1O75955 427 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 VCAM1P19320 739 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 LMNB1P20700 586 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 GNG11P61952 73 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 SNRPFP62306 86 aaKnown RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 ERVK-24P63145 666 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 MAP3K9P80192 1104 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 PABPC4Q13310 644 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 ZYXQ15942 572 aaKnown RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 TBC1D10BQ4KMP7 808 aaPredicted RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 ARHGAP29Q52LW3 1261 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 RINT1Q6NUQ1 792 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 C1orf186Q6ZWK4 172 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 SLC17A8Q8NDX2 589 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 CYP2W1Q8TAV3 490 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 SYTL5Q8TDW5 730 aaPredicted RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 TBC1D5Q92609 795 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 GLIS2Q9BZE0 524 aaPredicted RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 BHMT2Q9H2M3 363 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 ZSWIM4Q9H7M6 989 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 TYW1Q9NV66 732 aaKnown RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 GPRC5DQ9NZD1 345 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 CGNQ9P2M7 1197 aaKnown RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 DBR1Q9UK59 544 aaKnown RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 MYO6Q9UM54 1294 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 GJA3Q9Y6H8 435 aa10.83□□□□□ -0.68
COL1A1-210ENST00000504289 DICER1Q9UPY3 1922 aaKnown RBP10.83□□□□□ -0.68
COL1A1-210ENST00000504289 VWA5AO00534 786 aa10.82□□□□□ -0.68
COL1A1-210ENST00000504289 DKC1O60832 514 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL1A1-210ENST00000504289 P4HBP07237 508 aaKnown RBP10.82□□□□□ -0.68
COL1A1-210ENST00000504289 PTPRAP18433 802 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms