RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 TIPINQ9BVW5 301 aa10.14□□□□□ -0.79
NR1I3-216ENST00000502848 PANK2Q9BZ23 570 aa10.14□□□□□ -0.79
NR1I3-216ENST00000502848 UNC45AQ9H3U1 944 aa10.14□□□□□ -0.79
NR1I3-216ENST00000502848 SLC5A4Q9NY91 659 aa10.14□□□□□ -0.79
NR1I3-216ENST00000502848 SMCHD1A6NHR9 2005 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 SLC15A5A6NIM6 579 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 BECN2A8MW95 431 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 FOXN1O15353 648 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 KLRC4O43908 158 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 RGS20O76081 388 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 KIF20AO95235 890 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 MYCLP12524 364 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-216ENST00000502848 KCNA2P16389 499 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 DEKP35659 375 aaKnown RBP10.13□□□□□ -0.79
NR1I3-216ENST00000502848 AFMP43652 599 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 UBXN2AP68543 259 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 PDE4DQ08499 809 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 CCDC173Q0VFZ6 552 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 ITGB3BPQ13352 177 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-216ENST00000502848 NEDD9Q14511 834 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 C11orf57Q6ZUT1 292 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-216ENST00000502848 MIER3Q7Z3K6 550 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 C4orf19Q8IY42 314 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 FAM43AQ8N2R8 423 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 SYT2Q8N9I0 419 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-216ENST00000502848 ENOX1Q8TC92 643 aaKnown RBP10.13□□□□□ -0.79
NR1I3-216ENST00000502848 ZNF526Q8TF50 670 aaPredicted RBP10.13□□□□□ -0.79
NR1I3-216ENST00000502848 PDLIM2Q96JY6 352 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 ZSWIM4Q9H7M6 989 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 CREBZFQ9NS37 354 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 EXOC1Q9NV70 894 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 SEL1LQ9UBV2 794 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 DBR1Q9UK59 544 aaKnown RBP10.13□□□□□ -0.79
NR1I3-216ENST00000502848 KIAA1024Q9UPX6 916 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 PPME1Q9Y570 386 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 IVNS1ABPQ9Y6Y0 642 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 LOXHD1Q8IVV2 1947 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 LRRC37A2A6NM11 1700 aa10.13□□□□□ -0.79
NR1I3-216ENST00000502848 ASTN1O14525 1302 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 LCTP09848 1927 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 POTEB3A0JP26 581 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 FRMD3A2A2Y4 597 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 SOWAHBA6NEL2 793 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 FAM155AB1AL88 458 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-216ENST00000502848 MED24O75448 989 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 SLITRK3O94933 977 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 PLA2G4BP0C869 781 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 CYP2C8P10632 490 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 BMP6P22004 513 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 SCP2P22307 547 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 QARSP47897 775 aaKnown RBP10.12□□□□□ -0.79
NR1I3-216ENST00000502848 TM4SF4P48230 202 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 SLC12A3P55017 1021 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 ASIC1P78348 528 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 CNTN2Q02246 1040 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 EHHADHQ08426 723 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 NOGQ13253 232 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 CUL4BQ13620 913 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 GRB14Q14449 540 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 Q3C1V9 767 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 POTEBQ6S5H4 581 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 MAMDC4Q6UXC1 1216 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-216ENST00000502848 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 CCDC65Q8IXS2 484 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 GRAMD1CQ8IYS0 662 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 DDX12PQ92771 950 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 ATP6V0A1Q93050 837 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 PPP1R9BQ96SB3 815 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 PTPN18Q99952 460 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 JPH1Q9HDC5 661 aaPredicted RBP10.12□□□□□ -0.79
NR1I3-216ENST00000502848 VTA1Q9NP79 307 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 ANKEF1Q9NU02 776 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 RWDD2AQ9UIY3 292 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 ODF2LQ9ULJ1 636 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 PCDHA10Q9Y5I2 948 aa10.12□□□□□ -0.79
NR1I3-216ENST00000502848 SYNGAP1Q96PV0 1343 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 POTEFA5A3E0 1075 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 EML1O00423 815 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 BIN1O00499 593 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 PSMA7O14818 248 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 TLR2O60603 784 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 ATG7O95352 703 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 PSAPP07602 524 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 HOXC6P09630 235 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 PRKCSHP14314 528 aaPredicted RBP10.11□□□□□ -0.79
NR1I3-216ENST00000502848 GAP43P17677 238 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 GUCY2CP25092 1073 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 PSMC5P62195 406 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 DHX8Q14562 1220 aaKnown RBP10.11□□□□□ -0.79
NR1I3-216ENST00000502848 MCM6Q14566 821 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 ECM1Q16610 540 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 ZNF792Q3KQV3 632 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 POTEGQ6S5H5 508 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 KCNK18Q7Z418 384 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 PLEKHH3Q7Z736 793 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 LUZP1Q86V48 1076 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 DHX40Q8IX18 779 aaKnown RBP10.11□□□□□ -0.79
NR1I3-216ENST00000502848 RNF214Q8ND24 703 aa10.11□□□□□ -0.79
NR1I3-216ENST00000502848 LRRC15Q8TF66 581 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms