RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 CDK5RAP3Q96JB5 506 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 PRIMPOLQ96LW4 560 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 PTPN18Q99952 460 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 HSD17B14Q9BPX1 270 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 SPATC1LQ9H0A9 340 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 ACAD9Q9H845 621 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 SLC39A2Q9NP94 309 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 JADE2Q9NQC1 790 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 PRDM10Q9NQV6 1147 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 TBC1D7Q9P0N9 293 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 NFE2L3Q9Y4A8 694 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 LOC285556D6RIA3 1793 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 LCTP09848 1927 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
CPNE4-202ENST00000502818 SOWAHBA6NEL2 793 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 RSPH10B2B2RC85 870 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 RHOBTB3O94955 611 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 CAVIN2O95810 425 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 CCNE2O96020 404 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 RSPH10BP0C881 870 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 CYP11B2P19099 503 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 GTF2F1P35269 517 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPNE4-202ENST00000502818 SLC12A3P55017 1021 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 PDE4DQ08499 809 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 PPP2R5CQ13362 524 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 UGCGQ16739 394 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 ZNF658Q5TYW1 1059 aaPredicted RBP8.17□□□□□ -1.1
CPNE4-202ENST00000502818 PPP4R3CPQ6ZMV5 832 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 TRMT1LQ7Z2T5 733 aaKnown RBP8.17□□□□□ -1.1
CPNE4-202ENST00000502818 VSIG10LQ86VR7 867 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 TPH2Q8IWU9 490 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 TRIML1Q8N9V2 468 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 FGD4Q96M96 766 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 RAB34Q9BZG1 259 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 XPO4Q9C0E2 1151 aaKnown RBP8.17□□□□□ -1.1
CPNE4-202ENST00000502818 NAT10Q9H0A0 1025 aaKnown RBP8.17□□□□□ -1.1
CPNE4-202ENST00000502818 PORCNQ9H237 461 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 IFNKQ9P0W0 207 aa8.17□□□□□ -1.1
CPNE4-202ENST00000502818 MYPNQ86TC9 1320 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 RBAK-RBAKDNI3L0D1 243 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 IKBKBO14920 756 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 FDX1P10109 184 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 IDEP14735 1019 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 ZNF18P17022 549 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 RPA1P27694 616 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 FANCCQ00597 558 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 SP2Q02086 613 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 MTMR1Q13613 665 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 TMEM63BQ5T3F8 832 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 SARM1Q6SZW1 724 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 GPBP1Q86WP2 473 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 RIOX2Q8IUF8 465 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 ADSSL1Q8N142 457 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 NELFBQ8WX92 580 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 PYM1Q9BRP8 204 aaKnown RBP8.16□□□□□ -1.1
CPNE4-202ENST00000502818 KCNF1Q9H3M0 494 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 STK17AQ9UEE5 414 aa8.16□□□□□ -1.1
CPNE4-202ENST00000502818 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.1
CPNE4-202ENST00000502818 CCL15-CCL14A0A0B4J2E2 113 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 SFI1A8K8P3 1242 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 SP4Q02446 784 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 EHHADHQ08426 723 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 GOLGA8FQ08AF8 430 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 GOLGA8DPQ0D2H9 430 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 SNAPC2Q13487 334 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 CCL15Q16663 113 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 EEPD1Q7L9B9 569 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 APTXQ7Z2E3 356 aaKnown RBP8.15□□□□□ -1.1
CPNE4-202ENST00000502818 ANKRD35Q8N283 1001 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 C17orf53Q8N3J3 647 aaPredicted RBP8.15□□□□□ -1.1
CPNE4-202ENST00000502818 GIMAP8Q8ND71 665 aaPredicted RBP8.15□□□□□ -1.1
CPNE4-202ENST00000502818 ENOX1Q8TC92 643 aaKnown RBP8.15□□□□□ -1.1
CPNE4-202ENST00000502818 BHMT2Q9H2M3 363 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 IKZF4Q9H2S9 585 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 CUEDC2Q9H467 287 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 EHMT1Q9H9B1 1298 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 SYNRGQ9UMZ2 1314 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 A0A0G2JMZ2 1700 aa8.15□□□□□ -1.1
CPNE4-202ENST00000502818 SMTNL1A8MU46 457 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 PDHXO00330 501 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 BCRP11274 1271 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 CASP5P51878 434 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 C1QTNF8P60827 252 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 LRMPQ12912 555 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 COASYQ13057 564 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 KCNB1Q14721 858 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 SPRYD7Q5W111 196 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 IRF2BP1Q8IU81 584 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 ANKRD13CQ8N6S4 541 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 DUSP9Q99956 384 aaKnown RBP8.15□□□□□ -1.11
CPNE4-202ENST00000502818 POLR3CQ9BUI4 534 aaPredicted RBP8.15□□□□□ -1.11
CPNE4-202ENST00000502818 TEKT3Q9BXF9 490 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 SEMA6BQ9H3T3 888 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 EXOC1Q9NV70 894 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 PCDHA2Q9Y5H9 948 aa8.15□□□□□ -1.11
CPNE4-202ENST00000502818 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.15□□□□□ -1.11
CPNE4-202ENST00000502818 KCNA2P16389 499 aa8.14□□□□□ -1.11
CPNE4-202ENST00000502818 ERCC5P28715 1186 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms