RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 USH1GQ495M9 461 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 BTNL9Q6UXG8 535 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
VCAN-204ENST00000502527 ATRNL1Q5VV63 1379 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 ARFGEF1Q9Y6D6 1849 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 CETN3O15182 167 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 APBA3O96018 575 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 SNAP25P60880 206 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 ADAM9Q13443 819 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 CASP8Q14790 479 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 MAP9Q49MG5 647 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 SLC9C1Q4G0N8 1177 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 SFMBT2Q5VUG0 894 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 MSL1Q68DK7 614 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 SYT2Q8N9I0 419 aaPredicted RBP18.29■□□□□ 0.52
VCAN-204ENST00000502527 LENG9Q96B70 501 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 ZHX3Q9H4I2 956 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 PDE11AQ9HCR9 933 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.29■□□□□ 0.52
VCAN-204ENST00000502527 H3BQF6 201 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 GH2P01242 217 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 SERPING1P05155 500 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 CIITAP33076 1130 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 RAD51AP2Q09MP3 1159 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 HGSNATQ68CP4 663 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
VCAN-204ENST00000502527 ACBD3Q9H3P7 528 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 TDRD3Q9H7E2 651 aaKnown RBP18.28■□□□□ 0.52
VCAN-204ENST00000502527 MLXIPQ9HAP2 919 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 SYNPO2Q9UMS6 1093 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 CAPN6Q9Y6Q1 641 aa18.28■□□□□ 0.52
VCAN-204ENST00000502527 FAM86B1E9PN63 330 aa18.27■□□□□ 0.52
VCAN-204ENST00000502527 ZNF185O15231 689 aa18.27■□□□□ 0.52
VCAN-204ENST00000502527 NOL4O94818 638 aa18.27■□□□□ 0.52
VCAN-204ENST00000502527 MOCS3O95396 460 aa18.27■□□□□ 0.52
VCAN-204ENST00000502527 FAM86B2P0C5J1 330 aa18.27■□□□□ 0.52
VCAN-204ENST00000502527 GIT2Q14161 759 aa18.27■□□□□ 0.52
VCAN-204ENST00000502527 TDRD12Q587J7 1177 aaKnown RBP18.27■□□□□ 0.52
VCAN-204ENST00000502527 SUGCTQ9HAC7 445 aa18.27■□□□□ 0.52
VCAN-204ENST00000502527 NLRC4Q9NPP4 1024 aa18.27■□□□□ 0.52
VCAN-204ENST00000502527 LUC7LQ9NQ29 371 aaKnown RBP18.27■□□□□ 0.52
VCAN-204ENST00000502527 RBAK-RBAKDNI3L0D1 243 aa18.27■□□□□ 0.51
VCAN-204ENST00000502527 SPATA31C1P0DKV0 1188 aa18.27■□□□□ 0.51
VCAN-204ENST00000502527 EPS15P42566 896 aa18.27■□□□□ 0.51
VCAN-204ENST00000502527 TRAF1Q13077 416 aa18.27■□□□□ 0.51
VCAN-204ENST00000502527 CCDC70Q6NSX1 233 aa18.27■□□□□ 0.51
VCAN-204ENST00000502527 RNF10Q8N5U6 811 aaKnown RBP18.27■□□□□ 0.51
VCAN-204ENST00000502527 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.51
VCAN-204ENST00000502527 CCDC66A2RUB6 948 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 PDE2AO00408 941 aaPredicted RBP18.26■□□□□ 0.51
VCAN-204ENST00000502527 CYP3A4P08684 503 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 TCP1P17987 556 aaKnown RBP18.26■□□□□ 0.51
VCAN-204ENST00000502527 POLR2FP61218 127 aaKnown RBP18.26■□□□□ 0.51
VCAN-204ENST00000502527 PSMC6P62333 389 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 GFPT1Q06210 699 aaPredicted RBP18.26■□□□□ 0.51
VCAN-204ENST00000502527 PABPC4Q13310 644 aaKnown RBP eCLIP18.26■□□□□ 0.51
VCAN-204ENST00000502527 CC2D2BQ6DHV5 1058 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 TEX2Q8IWB9 1127 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 PIK3CDO00329 1044 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 MEIS1O00470 390 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 MSH4O15457 936 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 NR2F2P24468 414 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 ZNF76P36508 570 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 ITIH3Q06033 890 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 AOC3Q16853 763 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 ZNF572Q7Z3I7 529 aaPredicted RBP18.26■□□□□ 0.51
VCAN-204ENST00000502527 CREG2Q8IUH2 290 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 KCTD17Q8N5Z5 321 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 NOX5Q96PH1 765 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 CSRNP1Q96S65 589 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 VIPAS39Q9H9C1 493 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 RNF216Q9NWF9 866 aaPredicted RBP18.26■□□□□ 0.51
VCAN-204ENST00000502527 TRAF3IP3Q9Y228 551 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 HYOU1Q9Y4L1 999 aa18.26■□□□□ 0.51
VCAN-204ENST00000502527 COL2A1P02458 1487 aaPredicted RBP18.26■□□□□ 0.51
VCAN-204ENST00000502527 JAG1P78504 1218 aa18.25■□□□□ 0.51
VCAN-204ENST00000502527 RASSF7Q02833 373 aa18.25■□□□□ 0.51
VCAN-204ENST00000502527 KNOP1Q1ED39 458 aaKnown RBP18.25■□□□□ 0.51
VCAN-204ENST00000502527 FRMD5Q7Z6J6 570 aa18.25■□□□□ 0.51
VCAN-204ENST00000502527 REEP2Q9BRK0 252 aa18.25■□□□□ 0.51
VCAN-204ENST00000502527 CRACR2AQ9BSW2 395 aa18.25■□□□□ 0.51
VCAN-204ENST00000502527 POLR3CQ9BUI4 534 aaPredicted RBP18.25■□□□□ 0.51
VCAN-204ENST00000502527 HERC5Q9UII4 1024 aaKnown RBP18.25■□□□□ 0.51
VCAN-204ENST00000502527 VAV3Q9UKW4 847 aa18.25■□□□□ 0.51
VCAN-204ENST00000502527 OPLAHO14841 1288 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 TLR2O60603 784 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 HSP90B2PQ58FF3 399 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 EPM2AIP1Q7L775 607 aaPredicted RBP18.24■□□□□ 0.51
VCAN-204ENST00000502527 SFR1Q86XK3 245 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 GPIHBP1Q8IV16 184 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 DRC1Q96MC2 740 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 PRR12Q9ULL5 1215 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 ERICH4A6NGS2 130 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 CALUO43852 315 aaPredicted RBP18.24■□□□□ 0.51
VCAN-204ENST00000502527 HOXA13P31271 388 aaPredicted RBP18.24■□□□□ 0.51
VCAN-204ENST00000502527 CASP5P51878 434 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 KCNH2Q12809 1159 aa18.24■□□□□ 0.51
VCAN-204ENST00000502527 TAF3Q5VWG9 929 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms