RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 EFCC1Q9HA90 598 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 ST7Q9NRC1 585 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 ARGLU1Q9NWB6 273 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 GPN3Q9UHW5 284 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 CCDC151A5D8V7 595 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 GOLGA8BA8MQT2 603 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 METTL12A8MUP2 240 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 ZNF213O14771 459 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 GPAA1O43292 621 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 PARNO95453 639 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 MMP1P03956 469 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 TUBBP07437 444 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 TOP1P11387 765 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 NFKB1P19838 968 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 PLCD1P51178 756 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 HNRNPH2P55795 449 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 SFSWAPQ12872 951 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 PNOCQ13519 176 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 TTF1Q15361 905 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 EZH2Q15910 746 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 TXNRD1Q16881 649 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 BEND6Q5SZJ8 279 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 CCDC181Q5TID7 509 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 SPECC1LQ69YQ0 1117 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 RPUSD2Q8IZ73 545 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 CEP120Q8N960 986 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 TMEM102Q8N9M5 508 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 FBXO27Q8NI29 283 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 WDR24Q96S15 920 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 STRBPQ96SI9 672 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 BAG1Q99933 345 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 CARD6Q9BX69 1037 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 PARD6BQ9BYG5 372 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 AATFQ9NY61 560 aaKnown RBP eCLIP4.42□□□□□ -1.7
CLTC-209ENST00000498711 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.42□□□□□ -1.7
CLTC-209ENST00000498711 KCNH3Q9ULD8 1083 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 GOLGB1Q14789 3259 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 PNPLA7Q6ZV29 1317 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 TNRC6CQ9HCJ0 1690 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 A0A096LPE4 126 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 A0A1W2PPZ6 126 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 ATXN7O15265 892 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 IMPDH2P12268 514 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 CASQ1P31415 396 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 LAMC2Q13753 1193 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 PPP2R5BQ15173 497 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 FXNQ16595 210 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 SPRED3Q2MJR0 410 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 OLFM4Q6UX06 510 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 CHST3Q7LGC8 479 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 SRGAP1Q7Z6B7 1085 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 TTC5Q8N0Z6 440 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 REXO1Q8N1G1 1221 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 ZBTB38Q8NAP3 1195 aaPredicted RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 WASF1Q92558 559 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 TNFRSF25Q93038 417 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 UTP14AQ9BVJ6 771 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 ANKZF1Q9H8Y5 726 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 MYO1AQ9UBC5 1043 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 ADD3Q9UEY8 706 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 LIMA1Q9UHB6 759 aaKnown RBP4.42□□□□□ -1.7
CLTC-209ENST00000498711 DACH1Q9UI36 760 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 ANAPC4Q9UJX5 808 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 ZNRF3Q9ULT6 936 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 L1RE1Q9UN81 338 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 SAMM50Q9Y512 469 aa4.42□□□□□ -1.7
CLTC-209ENST00000498711 FAM221AA4D161 298 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 TRPA1O75762 1119 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 MAP3K6O95382 1288 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 MCAMP43121 646 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 GYS2P54840 703 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 CABP4P57796 275 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 AMPD2Q01433 879 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 PPP2R3AQ06190 1150 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 FAAP100Q0VG06 881 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 POSTNQ15063 836 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 C2orf27AQ580R0 203 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 TTC39AQ5SRH9 613 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 SPATA1Q5VX52 437 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 TOGARAM2Q6ZUX3 1019 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 NOSTRINQ8IVI9 506 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 ASAP3Q8TDY4 903 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 STAG1Q8WVM7 1258 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 SHISA4Q96DD7 197 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 NEUROD6Q96NK8 337 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 GAS2L1Q99501 681 aaPredicted RBP4.41□□□□□ -1.7
CLTC-209ENST00000498711 TEX13AQ9BXU3 409 aaPredicted RBP4.41□□□□□ -1.7
CLTC-209ENST00000498711 PIH1D3Q9NQM4 214 aaKnown RBP4.41□□□□□ -1.7
CLTC-209ENST00000498711 GJB4Q9NTQ9 266 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 TMEM39AQ9NV64 488 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 RAI14Q9P0K7 980 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 CDC23Q9UJX2 597 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 PPME1Q9Y570 386 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 LAMB2P55268 1798 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 KHNYNO15037 678 aaKnown RBP4.41□□□□□ -1.7
CLTC-209ENST00000498711 ARHGAP25P42331 645 aa4.41□□□□□ -1.7
CLTC-209ENST00000498711 METAP2P50579 478 aaKnown RBP eCLIP4.41□□□□□ -1.7
CLTC-209ENST00000498711 SMC1AQ14683 1233 aaKnown RBP4.41□□□□□ -1.7
CLTC-209ENST00000498711 RILPL1Q5EBL4 403 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms