RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
CDK9-205ENST00000498339 MYO15AQ9UKN7 3530 aa13.52□□□□□ -0.24
CDK9-205ENST00000498339 BAZ2BQ9UIF8 2168 aaKnown RBP13.52□□□□□ -0.24
CDK9-205ENST00000498339 OPLAHO14841 1288 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 ZXDAP98168 799 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 TCF15Q12870 199 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 ADAM15Q13444 863 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 PAN2Q504Q3 1202 aaKnown RBP13.52□□□□□ -0.25
CDK9-205ENST00000498339 ANKRD45Q5TZF3 282 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 CYFIP1Q7L576 1253 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 ADGRD2Q7Z7M1 963 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 VSIG10LQ86VR7 867 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 FBXL6Q8N531 539 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 ENAHQ8N8S7 591 aaPredicted RBP13.52□□□□□ -0.25
CDK9-205ENST00000498339 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 CLP1Q92989 425 aaKnown RBP13.52□□□□□ -0.25
CDK9-205ENST00000498339 RILPL2Q969X0 211 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 UBAC1Q9BSL1 405 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 PLVAPQ9BX97 442 aa13.52□□□□□ -0.25
CDK9-205ENST00000498339 MAP3K20Q9NYL2 800 aaKnown RBP13.52□□□□□ -0.25
CDK9-205ENST00000498339 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
CDK9-205ENST00000498339 SALL3Q9BXA9 1300 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 GCOM1H8Y6P7 765 aaPredicted RBP13.51□□□□□ -0.25
CDK9-205ENST00000498339 LINC00271P0C7V0 271 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 POLR2MP0CAP2 368 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 IBSPP21815 317 aaPredicted RBP13.51□□□□□ -0.25
CDK9-205ENST00000498339 NRIP1P48552 1158 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 RRP1P56182 461 aaKnown RBP13.51□□□□□ -0.25
CDK9-205ENST00000498339 NEDD9Q14511 834 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 FAM26DQ5JW98 314 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
CDK9-205ENST00000498339 METTL7BQ6UX53 244 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 RBM23Q86U06 439 aaKnown RBP13.51□□□□□ -0.25
CDK9-205ENST00000498339 RSPH3Q86UC2 560 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 SMRP1Q8NCR6 262 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 ATOH1Q92858 354 aaPredicted RBP13.51□□□□□ -0.25
CDK9-205ENST00000498339 RPGRIP1Q96KN7 1286 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 BCAS3Q9H6U6 928 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 BARX2Q9UMQ3 279 aaPredicted RBP13.51□□□□□ -0.25
CDK9-205ENST00000498339 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
CDK9-205ENST00000498339 MRPL42Q9Y6G3 142 aaKnown RBP13.51□□□□□ -0.25
CDK9-205ENST00000498339 LOC730098B7Z3J9 87 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 KLRF2D3W0D1 207 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 ZBTB5O15062 677 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
CDK9-205ENST00000498339 CHRNA1P02708 482 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 NT5C2P49902 561 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 GHRHRQ02643 423 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 SIGLEC14Q08ET2 396 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 RUFY4Q6ZNE9 571 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 ZBTB33Q86T24 672 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 STAG2Q8N3U4 1231 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 MSLNLQ96KJ4 702 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 GPR20Q99678 358 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 RC3H2Q9HBD1 1191 aaKnown RBP13.5□□□□□ -0.25
CDK9-205ENST00000498339 USP15Q9Y4E8 981 aaPredicted RBP13.5□□□□□ -0.25
CDK9-205ENST00000498339 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
CDK9-205ENST00000498339 NRCAMQ92823 1304 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 FIBPO43427 364 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 DGKIO75912 1065 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 EYA4O95677 639 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 ITGB1P05556 798 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 DNAJB1P25685 340 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 MARK3P27448 753 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 PDE1AP54750 535 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 VCPP55072 806 aaKnown RBP13.49□□□□□ -0.25
CDK9-205ENST00000498339 COASYQ13057 564 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 TRAF1Q13077 416 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 PPFIA1Q13136 1202 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 LPIN1Q14693 890 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 SAMD3Q8N6K7 520 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 EFHBQ8N7U6 833 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 POF1BQ8WVV4 589 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 P2RX5Q93086 422 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 PHF7Q9BWX1 381 aaPredicted RBP13.49□□□□□ -0.25
CDK9-205ENST00000498339 IRF2BPLQ9H1B7 796 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 RTEL1Q9NZ71 1219 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 CLEC1BQ9P126 229 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 ZDBF2Q9HCK1 2354 aa13.49□□□□□ -0.25
CDK9-205ENST00000498339 FNDC1Q4ZHG4 1894 aaPredicted RBP13.48□□□□□ -0.25
CDK9-205ENST00000498339 ENPP3O14638 875 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 PPFIA3O75145 1194 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 CAMK1Q14012 370 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 IMMTQ16891 758 aaKnown RBP13.48□□□□□ -0.25
CDK9-205ENST00000498339 SPOUT1Q5T280 376 aaKnown RBP13.48□□□□□ -0.25
CDK9-205ENST00000498339 TSHZ1Q6ZSZ6 1077 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 CMTR2Q8IYT2 770 aaKnown RBP13.48□□□□□ -0.25
CDK9-205ENST00000498339 KLHL23Q8NBE8 558 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 ZNF689Q96CS4 500 aaPredicted RBP13.48□□□□□ -0.25
CDK9-205ENST00000498339 TLE6Q9H808 572 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 ZSWIM5Q9P217 1185 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 TUBE1Q9UJT0 475 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
CDK9-205ENST00000498339 M0QZ92 97 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 STAM2O75886 525 aa13.47□□□□□ -0.25
CDK9-205ENST00000498339 GLP2RO95838 553 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms