RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CNKSR3Q6P9H4 555 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 SERINC5Q86VE9 423 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 FBXL16Q8N461 479 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 ATP6V0A1Q93050 837 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 WNT8BQ93098 351 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 PGBD1Q96JS3 809 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 GAS2L1Q99501 681 aaPredicted RBP9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 ANO3Q9BYT9 981 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 AGXT2Q9BYV1 514 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 GLT8D2Q9H1C3 349 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 RNPEPQ9H4A4 650 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 JADE2Q9NQC1 790 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 YBX2Q9Y2T7 364 aaKnown RBP9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 TELO2Q9Y4R8 837 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 COL4A4P53420 1690 aaPredicted RBP9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 NLRC5Q86WI3 1866 aa9.7□□□□□ -0.86
HMGXB4-207ENST00000498212 TREHO43280 583 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 NBNO60934 754 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 CXCL10P02778 98 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 GNAT1P11488 350 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 SCG2P13521 617 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 MYOGP15173 224 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 THPOP40225 353 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 KCNJ6P48051 423 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 CLK2P49760 499 aaKnown RBP9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 AP3B2Q13367 1082 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 PPP2R2DQ66LE6 453 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 TRAF7Q6Q0C0 670 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 RUFY3Q7L099 469 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 PHOSPHO2Q8TCD6 241 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 SEPT1Q8WYJ6 367 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 MXRA8Q9BRK3 442 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 PRDM12Q9H4Q4 367 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 TMEM260Q9NX78 707 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 PPP4R2Q9NY27 417 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 PKD2L1Q9P0L9 805 aa9.69□□□□□ -0.86
HMGXB4-207ENST00000498212 EVPLQ92817 2033 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 EMSYQ7Z589 1322 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 GSTTP1A0A1W2PQM5 241 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 ESYT2A0FGR8 921 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 KIF28PB7ZC32 967 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 PRPF3O43395 683 aaKnown RBP9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 SREBF1P36956 1147 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 WDR5P61964 334 aaKnown RBP9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 ARHGAP4P98171 946 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 ERICH6BQ5W0A0 696 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 HERC6Q8IVU3 1022 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 CCDC12Q8WUD4 166 aaPredicted RBP9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 KCNH7Q9NS40 1196 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 SETD4Q9NVD3 440 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 ERAP1Q9NZ08 941 aa9.68□□□□□ -0.86
HMGXB4-207ENST00000498212 CDH23Q9H251 3354 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 NFASCO94856 1347 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 NRCAMQ92823 1304 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 ABHD14A-ACY1A0A1B0GW23 586 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 RSPH10B2B2RC85 870 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 EFCAB14O75071 495 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 CAND2O75155 1236 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 LGR5O75473 907 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 CA3P07451 260 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 RSPH10BP0C881 870 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 ARP10275 920 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 MARK3P27448 753 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 PDIA3P30101 505 aaKnown RBP9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 ZNF76P36508 570 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 EVCP57679 992 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 CCT2P78371 535 aaKnown RBP9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 ADAM17P78536 824 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 TOB2Q14106 344 aaPredicted RBP9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 IKBKEQ14164 716 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 MBTPS1Q14703 1052 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 PKN1Q16512 942 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 CEP55Q53EZ4 464 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 JAKMIP3Q5VZ66 844 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 MCTP2Q6DN12 878 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 CYP2W1Q8TAV3 490 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 LMBR1Q8WVP7 490 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 GLG1Q92896 1179 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 PHKBQ93100 1093 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 SDF4Q9BRK5 362 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 RNF26Q9BY78 433 aaPredicted RBP9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 ZMYND12Q9H0C1 365 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 SMARCAD1Q9H4L7 1026 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 C6orf50Q9HD87 102 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 JPH1Q9HDC5 661 aaPredicted RBP9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 SLC9A2Q9UBY0 812 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 CYP46A1Q9Y6A2 500 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 RALGAPA2Q2PPJ7 1873 aa9.67□□□□□ -0.86
HMGXB4-207ENST00000498212 EYSQ5T1H1 3165 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 MEIS1O00470 390 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 DLL1O00548 723 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 TLL1O43897 1013 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 CTSHP09668 335 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 IFNAR1P17181 557 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 IGFBP4P22692 258 aa9.66□□□□□ -0.86
HMGXB4-207ENST00000498212 GNA11P29992 359 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms