RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 NPLOC4Q8TAT6 608 aa12.31□□□□□ -0.44
MACF1-225ENST00000497807 GLMNQ92990 594 aa12.31□□□□□ -0.44
MACF1-225ENST00000497807 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.31□□□□□ -0.44
MACF1-225ENST00000497807 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
MACF1-225ENST00000497807 RGPD3A6NKT7 1758 aaPredicted RBP12.3□□□□□ -0.44
MACF1-225ENST00000497807 RGPD4Q7Z3J3 1758 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 PRC1O43663 620 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 VARSP26640 1264 aaKnown RBP12.3□□□□□ -0.44
MACF1-225ENST00000497807 PDE6CP51160 858 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 GPC3P51654 580 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 LONRF2Q1L5Z9 754 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 KIAA1614Q5VZ46 1190 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 NOP9Q86U38 636 aaKnown RBP12.3□□□□□ -0.44
MACF1-225ENST00000497807 CARNMT1Q8N4J0 409 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 CFAP36Q96G28 342 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 SNF8Q96H20 258 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 SLC39A13Q96H72 371 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 SETDB2Q96T68 719 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 PDE11AQ9HCR9 933 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 AVENQ9NQS1 362 aaPredicted RBP12.3□□□□□ -0.44
MACF1-225ENST00000497807 TCP11L1Q9NUJ3 509 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 COL5A3P25940 1745 aaPredicted RBP12.3□□□□□ -0.44
MACF1-225ENST00000497807 LOC105371267A0A1B0GV96 52 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 POLR2EP19388 210 aaKnown RBP12.3□□□□□ -0.44
MACF1-225ENST00000497807 TCIRG1Q13488 830 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 CEP128Q6ZU80 1094 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 AADATQ8N5Z0 425 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 LPIN2Q92539 896 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 CDKL2Q92772 493 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 VPS50Q96JG6 964 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 METTL22Q9BUU2 404 aaPredicted RBP12.3□□□□□ -0.44
MACF1-225ENST00000497807 HERC2P3Q9BVR0 1158 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
MACF1-225ENST00000497807 OCEL1Q9H607 264 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 RHBDL2Q9NX52 303 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 ZNF180Q9UJW8 692 aa12.3□□□□□ -0.44
MACF1-225ENST00000497807 H0YC42 278 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 CPLX1O14810 134 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 RASA4O43374 803 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 BAIAP3O94812 1187 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 CLTAP09496 248 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 IDEP14735 1019 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 GLULP15104 373 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 STAT3P40763 770 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 RCAN1P53805 252 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 TPD52P55327 224 aaPredicted RBP12.29□□□□□ -0.44
MACF1-225ENST00000497807 CWF19L2Q2TBE0 894 aaKnown RBP12.29□□□□□ -0.44
MACF1-225ENST00000497807 WDR45BQ5MNZ6 344 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 FAM173BQ6P4H8 233 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 HDXQ7Z353 690 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 PALB2Q86YC2 1186 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 CCHCR1Q8TD31 782 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 GLT8D2Q9H1C3 349 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 ADCY9O60503 1353 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 PCNAP12004 261 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 DSTNP60981 165 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 NFIXQ14938 502 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 TMTC4Q5T4D3 741 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 ZNF598Q86UK7 904 aaKnown RBP12.29□□□□□ -0.44
MACF1-225ENST00000497807 SPARTQ8N0X7 666 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 ANKRD27Q96NW4 1050 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 RBM14Q96PK6 669 aaKnown RBP12.29□□□□□ -0.44
MACF1-225ENST00000497807 PRPF18Q99633 342 aaKnown RBP12.29□□□□□ -0.44
MACF1-225ENST00000497807 GBP3Q9H0R5 595 aa12.29□□□□□ -0.44
MACF1-225ENST00000497807 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 ACCSLQ4AC99 568 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 ARHGEF2Q92974 986 aaKnown RBP12.28□□□□□ -0.44
MACF1-225ENST00000497807 ALPK1Q96QP1 1244 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 NUP58Q9BVL2 599 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 PARVBQ9HBI1 364 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 NSFL1CQ9UNZ2 370 aaKnown RBP12.28□□□□□ -0.44
MACF1-225ENST00000497807 RREB1Q92766 1687 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.28□□□□□ -0.44
MACF1-225ENST00000497807 TNFRSF10AO00220 468 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 MMP10P09238 476 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 GPSM2P81274 684 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 E2F2Q14209 437 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 GRAMD4Q6IC98 578 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 C3orf62Q6ZUJ4 267 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 FUKQ8N0W3 1084 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 SCAIQ8N9R8 606 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 AFAP1L1Q8TED9 768 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 WDR60Q8WVS4 1066 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 RSAD2Q8WXG1 361 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 IFT81Q8WYA0 676 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
MACF1-225ENST00000497807 TRAPPC9Q96Q05 1148 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 CENPHQ9H3R5 247 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 TPK1Q9H3S4 243 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 CYLDQ9NQC7 956 aa12.28□□□□□ -0.44
MACF1-225ENST00000497807 ZC3H7BQ9UGR2 993 aaKnown RBP12.28□□□□□ -0.44
MACF1-225ENST00000497807 LAMB4A4D0S4 1761 aa12.27□□□□□ -0.44
MACF1-225ENST00000497807 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.44
MACF1-225ENST00000497807 ANXA13P27216 316 aa12.27□□□□□ -0.44
MACF1-225ENST00000497807 CETN2P41208 172 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms