RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 KIF3AQ9Y496 699 aa13.32□□□□□ -0.28
MRPL55-234ENST00000497758 HAS3O00219 553 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 MMP1P03956 469 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 CYP2C9P11712 490 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 BMP8BP34820 402 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 ACTR2P61160 394 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 FPGSQ05932 587 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 LETM2Q2VYF4 491 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 NEK8Q86SG6 692 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 DIS3L2Q8IYB7 885 aaKnown RBP13.31□□□□□ -0.28
MRPL55-234ENST00000497758 NAP1L4Q99733 375 aaKnown RBP13.31□□□□□ -0.28
MRPL55-234ENST00000497758 SMARCAD1Q9H4L7 1026 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 TBC1D22BQ9NU19 505 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 HDAC6Q9UBN7 1215 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 GTF2IRD1Q9UHL9 959 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 TELO2Q9Y4R8 837 aa13.31□□□□□ -0.28
MRPL55-234ENST00000497758 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 BACH1O14867 736 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 CD2BP2O95400 341 aaKnown RBP13.3□□□□□ -0.28
MRPL55-234ENST00000497758 TDP2O95551 362 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 SMIM10L2AP0DMW4 78 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 SMIM10L2BP0DMW5 78 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
MRPL55-234ENST00000497758 ITGB8P26012 769 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 CYP2C18P33260 490 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 GUCY1B3Q02153 619 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 NR5A1Q13285 461 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 BFSP2Q13515 415 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 GNL2Q13823 731 aaKnown RBP13.3□□□□□ -0.28
MRPL55-234ENST00000497758 GDF6Q6KF10 455 aaPredicted RBP13.3□□□□□ -0.28
MRPL55-234ENST00000497758 MFSD5Q6N075 450 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 MOXD1Q6UVY6 613 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 TMEM199Q8N511 208 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 CCDC155Q8N6L0 562 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 NOC4LQ9BVI4 516 aaKnown RBP13.3□□□□□ -0.28
MRPL55-234ENST00000497758 ERAP1Q9NZ08 941 aa13.3□□□□□ -0.28
MRPL55-234ENST00000497758 DDX25Q9UHL0 483 aaKnown RBP13.3□□□□□ -0.28
MRPL55-234ENST00000497758 DOCK5Q9H7D0 1870 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 CYP3A7-CYP3A51PA0A087WV96 503 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 A0A1W2PPC1 479 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 C17orf102A2RUQ5 167 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 MSH4O15457 936 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 MARCH6O60337 910 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 CCNT1O60563 726 aaKnown RBP13.29□□□□□ -0.28
MRPL55-234ENST00000497758 GAS7O60861 476 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 GNAT1P11488 350 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 CYP3A7P24462 503 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 MARK3P27448 753 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 KRT76Q01546 638 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 PPIGQ13427 754 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■■□ 24.6
MRPL55-234ENST00000497758 Q4G0T1 1027 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 HABP4Q5JVS0 413 aaKnown RBP13.29□□□□□ -0.28
MRPL55-234ENST00000497758 LRCH2Q5VUJ6 765 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 FAM160B1Q5W0V3 765 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 MIS18BP1Q6P0N0 1132 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 RETREG2Q8NC44 543 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 LENG9Q96B70 501 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 PRO3102Q9H379 93 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 SAMM50Q9Y512 469 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 EMSYQ7Z589 1322 aa13.29□□□□□ -0.28
MRPL55-234ENST00000497758 LAMA2P24043 3122 aaKnown RBP13.28□□□□□ -0.28
MRPL55-234ENST00000497758 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 DHX15O43143 795 aaKnown RBP13.28□□□□□ -0.28
MRPL55-234ENST00000497758 LGR5O75473 907 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 CCNE2O96020 404 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 STAT5BP51692 787 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 CCL23P55773 120 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 ZNF746Q6NUN9 644 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-234ENST00000497758 SMAP1Q8IYB5 467 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-234ENST00000497758 TDHQ8IZJ6 230 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 CAGE1Q8TC20 777 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 TNPO1Q92973 898 aaKnown RBP13.28□□□□□ -0.28
MRPL55-234ENST00000497758 ATP6V0A1Q93050 837 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 RIT2Q99578 217 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 TEKT3Q9BXF9 490 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
MRPL55-234ENST00000497758 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-234ENST00000497758 LTBP2Q14767 1821 aa13.27□□□□□ -0.28
MRPL55-234ENST00000497758 FAM205CA6NFA0 338 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 WDR64B1ANS9 1081 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 CHMP2AO43633 222 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 EDIL3O43854 480 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 PSAPP07602 524 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 CSF2RAP15509 400 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 SLC26A2P50443 739 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 PPFIA1Q13136 1202 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 PTK7Q13308 1070 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 PLPPR4Q7Z2D5 763 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 FBXO18Q8NFZ0 1043 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 SLC5A5Q92911 643 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 TNFRSF25Q93038 417 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 RNPEPQ9H4A4 650 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 SETD4Q9NVD3 440 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 PCDHA10Q9Y5I2 948 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 UMODL1Q5DID0 1318 aa13.27□□□□□ -0.29
MRPL55-234ENST00000497758 NRCAMQ92823 1304 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms