RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 TNIP1Q15025 636 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 FAM83BQ5T0W9 1011 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 KIF6Q6ZMV9 814 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 FBXL16Q8N461 479 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 SPATA5Q8NB90 893 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 SPIRE2Q8WWL2 714 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 SHISA4Q96DD7 197 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 ZMYND12Q9H0C1 365 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 SLIT1O75093 1534 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 GSTTP1A0A1W2PQM5 241 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 DPPA5A6NC42 116 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 CLSTN1O94985 981 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 BYSLQ13895 437 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 UBE3CQ15386 1083 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 MAN2A1Q16706 1144 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 C11orf91Q3C1V1 193 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 BLIDQ8IZY5 108 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 B4GALNT2Q8NHY0 566 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 EPS8L3Q8TE67 593 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 NAF1Q96HR8 494 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 PHF20Q9BVI0 1012 aa11.57□□□□□ -0.56
TRAPPC12-223ENST00000497597 KLHL33A6NCF5 533 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 GBP1P32455 592 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 RASIP1Q5U651 963 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 ARMC9Q7Z3E5 817 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 ZSCAN10Q96SZ4 725 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 KDM4CQ9H3R0 1056 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 DNAJC8O75937 253 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 ACTN1P12814 892 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 PECAM1P16284 738 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 ATP4AP20648 1035 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 MSH2P43246 934 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 ZNF131P52739 623 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 DYNLL1P63167 89 aaKnown RBP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 SLC29A2Q14542 456 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 PKN1Q16512 942 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 TXNRD1Q16881 649 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 CAPN12Q6ZSI9 719 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 TTLL11Q8NHH1 800 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 NEK9Q8TD19 979 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 FAM129AQ9BZQ8 928 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 METTL5Q9NRN9 209 aaKnown RBP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.56□□□□□ -0.564e-7■■■■□ 24.4
TRAPPC12-223ENST00000497597 RTL9Q8NET4 1388 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 PXDNQ92626 1479 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 STX2P32856 288 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 LONP1P36776 959 aaKnown RBP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 RFC5P40937 340 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 AMPD3Q01432 767 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 CUL1Q13616 776 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 NBPF20Q3BBV1 942 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 CNNM4Q6P4Q7 775 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 PDXDC1Q6P996 788 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 SEPT14Q6ZU15 432 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 SRBD1Q8N5C6 995 aaKnown RBP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 METTL13Q8N6R0 699 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 GLIS3Q8NEA6 775 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 DTX3LQ8TDB6 740 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 CTNNBL1Q8WYA6 563 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 TMEM237Q96Q45 408 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 TRIM7Q9C029 511 aa11.56□□□□□ -0.56
TRAPPC12-223ENST00000497597 ATXN2Q99700 1313 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 ARHGAP23Q9P227 1491 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 A0A1W2PRG0 241 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 USP17L12C9JPN9 530 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 USP17L21D6R901 530 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 PPIP5K2O43314 1243 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 LUC7L3O95232 432 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 SV2BQ7L1I2 683 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 CCHCR1Q8TD31 782 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 NUDCD1Q96RS6 583 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 ORAI2Q96SN7 254 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 KLHL14Q9P2G3 628 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 DAAM1Q9Y4D1 1078 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 GRID2IPA4D2P6 1211 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 CCDC169A6NNP5 214 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 CETN3O15182 167 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 TUBP50607 506 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 CASP7P55210 303 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 RASGRF1Q13972 1273 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 TSNAXIP1Q2TAA8 658 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 LRRC23Q53EV4 343 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 ZC3H18Q86VM9 953 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 GIMAP8Q8ND71 665 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 CNOT10Q9H9A5 744 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 CHORDC1Q9UHD1 332 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 C2CD2Q9Y426 696 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 WDR19Q8NEZ3 1342 aa11.55□□□□□ -0.56
TRAPPC12-223ENST00000497597 MYH6P13533 1939 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 F8VZ95 297 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 CCND1P24385 295 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 RPS6KA3P51812 740 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 TRAF1Q13077 416 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 LONRF1Q17RB8 773 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 MIIPQ5JXC2 388 aa11.54□□□□□ -0.56
TRAPPC12-223ENST00000497597 RNF220Q5VTB9 566 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms