RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SUN1O94901 812 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 FTCDO95954 541 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 AGTP01019 485 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 PDE6AP16499 860 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 ATP6V1C1P21283 382 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 MCAMP43121 646 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 USP11P51784 963 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 DHX9Q08211 1270 aaKnown RBP14.18□□□□□ -0.14
VEGFA-215ENST00000497139 FUT2Q10981 343 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 PSMD2Q13200 908 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 NAALADL2Q58DX5 795 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 ARHGAP22Q7Z5H3 698 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 CCDC82Q8N4S0 544 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 ELAC2Q9BQ52 826 aaKnown RBP14.18□□□□□ -0.14
VEGFA-215ENST00000497139 GORASP1Q9BQQ3 440 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 CCSER1Q9C0I3 900 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 ABCF3Q9NUQ8 709 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 INTS9Q9NV88 658 aaKnown RBP14.18□□□□□ -0.14
VEGFA-215ENST00000497139 GNAT2P19087 354 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 EHHADHQ08426 723 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 CUL3Q13618 768 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 NPY5RQ15761 445 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 FOXR2Q6PJQ5 311 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 SPATA21Q7Z572 469 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 COL23A1Q86Y22 540 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-215ENST00000497139 ANKRD13CQ8N6S4 541 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 MDM1Q8TC05 714 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 ZNF496Q96IT1 587 aaPredicted RBP14.18□□□□□ -0.14
VEGFA-215ENST00000497139 TRAPPC9Q96Q05 1148 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 TRIM7Q9C029 511 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 NEUROG2Q9H2A3 272 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 PNMA2Q9UL42 364 aa14.18□□□□□ -0.14
VEGFA-215ENST00000497139 CALM1P0DP23 149 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 CALM2P0DP24 149 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 CALM3P0DP25 149 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 GNAZP19086 355 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 GNPTABQ3T906 1256 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 ANO7Q6IWH7 933 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 FAM81AQ8TBF8 368 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 SH3TC2Q8TF17 1288 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.17□□□□□ -0.147e-13■■□□□ 12.9
VEGFA-215ENST00000497139 EPB41L4AQ9HCS5 686 aaPredicted RBP14.17□□□□□ -0.14
VEGFA-215ENST00000497139 FAM207AQ9NSI2 230 aaPredicted RBP14.17□□□□□ -0.14
VEGFA-215ENST00000497139 RREB1Q92766 1687 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 COQ9O75208 318 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 RNF8O76064 485 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 KIF4AO95239 1232 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 GCP02774 474 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 KRT16P08779 473 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 CCNB1P14635 433 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 ACADSP16219 412 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 PPP2R5EQ16537 467 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 B4GALNT2Q8NHY0 566 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 ANKS1AQ92625 1134 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 TMEM109Q9BVC6 243 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 NACAP1Q9BZK3 213 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 VCXQ9H320 206 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 CEP72Q9P209 647 aa14.17□□□□□ -0.14
VEGFA-215ENST00000497139 UTP11Q9Y3A2 253 aaKnown RBP14.17□□□□□ -0.14
VEGFA-215ENST00000497139 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
VEGFA-215ENST00000497139 CDC25CP30307 473 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 CCDC15Q0P6D6 951 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 SLC39A6Q13433 755 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 SLC18A3Q16572 532 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 C6orf118Q5T5N4 469 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.16□□□□□ -0.145e-7■□□□□ 8.4
VEGFA-215ENST00000497139 SPICE1Q8N0Z3 855 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 C4orf32Q8N8J7 132 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 ADAM7Q9H2U9 754 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 MMRN2Q9H8L6 949 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 RXFP1Q9HBX9 757 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 EPHB6O15197 1021 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 GJB6O95452 261 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 GSTA2P09210 222 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 SETSIPP0DME0 302 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 PARP6Q2NL67 630 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 TDRD12Q587J7 1177 aaKnown RBP14.16□□□□□ -0.14
VEGFA-215ENST00000497139 CNNM4Q6P4Q7 775 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 BTNL9Q6UXG8 535 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 SESTD1Q86VW0 696 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 TTC5Q8N0Z6 440 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 CMTR1Q8N1G2 835 aaKnown RBP14.16□□□□□ -0.14
VEGFA-215ENST00000497139 RASGEF1CQ8N431 466 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 FAM167BQ9BTA0 163 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 TRIM4Q9C037 500 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.16□□□□□ -0.145e-7■■□□□ 12.5
VEGFA-215ENST00000497139 CNOT7Q9UIV1 285 aaKnown RBP14.16□□□□□ -0.14
VEGFA-215ENST00000497139 SPATA31A3Q5VYP0 1347 aa14.16□□□□□ -0.14
VEGFA-215ENST00000497139 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
VEGFA-215ENST00000497139 KCNK3O14649 394 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 IMPDH2P12268 514 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 KLRC1P26715 233 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 KLC1Q07866 573 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 SEC23AQ15436 765 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 DIXDC1Q155Q3 683 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 TSNAXIP1Q2TAA8 658 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 CCDC178Q5BJE1 867 aa14.15□□□□□ -0.14
VEGFA-215ENST00000497139 RRP12Q5JTH9 1297 aaKnown RBP14.15□□□□□ -0.14
VEGFA-215ENST00000497139 SFMBT2Q5VUG0 894 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms