RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
SRSF4-205ENST00000497015 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
SRSF4-205ENST00000497015 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
SRSF4-205ENST00000497015 PRR23AA6NEV1 266 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 F2P00734 622 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 ZNF286BP0CG31 522 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 THPOP40225 353 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 SIGLEC14Q08ET2 396 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 MCM6Q14566 821 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 SYDE2Q5VT97 1194 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 ERMP1Q7Z2K6 904 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 SERINC5Q86VE9 423 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 RC3H2Q9HBD1 1191 aaKnown RBP11.43□□□□□ -0.58
SRSF4-205ENST00000497015 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 MICAL3Q7RTP6 2002 aa11.43□□□□□ -0.58
SRSF4-205ENST00000497015 FRMPD2Q68DX3 1309 aaPredicted RBP11.42□□□□□ -0.58
SRSF4-205ENST00000497015 ZNF213O14771 459 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 SGSM2O43147 1006 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 MAP3K13O43283 966 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 KRT37O76014 449 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 CSPG5O95196 566 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 GLP2RO95838 553 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 RB1P06400 928 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 HOXD8P13378 290 aaPredicted RBP11.42□□□□□ -0.58
SRSF4-205ENST00000497015 RBM10P98175 930 aaKnown RBP11.42□□□□□ -0.58
SRSF4-205ENST00000497015 CTDSPL2Q05D32 466 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 DGKDQ16760 1214 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 IMMTQ16891 758 aaKnown RBP11.42□□□□□ -0.58
SRSF4-205ENST00000497015 CASC1Q6TDU7 716 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 SMRP1Q8NCR6 262 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 CLP1Q92989 425 aaKnown RBP11.42□□□□□ -0.58
SRSF4-205ENST00000497015 LMAN2LQ9H0V9 348 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 BCAS3Q9H6U6 928 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 GPCPD1Q9NPB8 672 aa11.42□□□□□ -0.58
SRSF4-205ENST00000497015 PTPRZ1P23471 2315 aaPredicted RBP11.42□□□□□ -0.58
SRSF4-205ENST00000497015 HOXC8P31273 242 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 CTNNB1P35222 781 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 NBL1P41271 181 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 COASYQ13057 564 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 MFSD6Q6ZSS7 791 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 FIBCD1Q8N539 461 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 DCAF4Q8WV16 495 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 EMID1Q96A84 441 aaPredicted RBP11.41□□□□□ -0.58
SRSF4-205ENST00000497015 ZNF689Q96CS4 500 aaPredicted RBP11.41□□□□□ -0.58
SRSF4-205ENST00000497015 IL17RAQ96F46 866 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 C16orf70Q9BSU1 422 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 IFIH1Q9BYX4 1025 aaKnown RBP11.41□□□□□ -0.58
SRSF4-205ENST00000497015 CNNM2Q9H8M5 875 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 TCP11L1Q9NUJ3 509 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 PLAGL2Q9UPG8 496 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 PCDHGC5Q9Y5F6 944 aa11.41□□□□□ -0.58
SRSF4-205ENST00000497015 EMSYQ7Z589 1322 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 CACNA1HO95180 2353 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.58
SRSF4-205ENST00000497015 TSPY2A6NKD2 308 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 TREHO43280 583 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
SRSF4-205ENST00000497015 SORBS3O60504 671 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 MMP1P03956 469 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 ID4P47928 161 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 SP2Q02086 613 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 CCDC96Q2M329 555 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 HSDL1Q3SXM5 330 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 CCDC178Q5BJE1 867 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 RGS22Q8NE09 1264 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 SPPL3Q8TCT6 385 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 SYTL5Q8TDW5 730 aaPredicted RBP11.4□□□□□ -0.58
SRSF4-205ENST00000497015 SEPT8Q92599 483 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 CCDC97Q96F63 343 aaPredicted RBP11.4□□□□□ -0.58
SRSF4-205ENST00000497015 RPGRIP1Q96KN7 1286 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 RIPOR3Q96MK2 946 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 TMEM47Q9BQJ4 181 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 CPVLQ9H3G5 476 aa11.4□□□□□ -0.58
SRSF4-205ENST00000497015 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
SRSF4-205ENST00000497015 USP15Q9Y4E8 981 aaPredicted RBP11.4□□□□□ -0.58
SRSF4-205ENST00000497015 NLRC5Q86WI3 1866 aa11.4□□□□□ -0.59
SRSF4-205ENST00000497015 CDC45O75419 566 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 ICAM3P32942 547 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 NDUFV1P49821 464 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 CRIPAKQ8N1N5 446 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 EFHBQ8N7U6 833 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 TMEM105Q8N8V8 129 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 VN1R2Q8NFZ6 395 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 PPTC7Q8NI37 304 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 SUSD6Q92537 303 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 ESR2Q92731 530 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 MAP4K1Q92918 833 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 TTC14Q96N46 770 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 ESYT1Q9BSJ8 1104 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 C11orf84Q9BUA3 381 aaPredicted RBP11.39□□□□□ -0.59
SRSF4-205ENST00000497015 PHF7Q9BWX1 381 aaPredicted RBP11.39□□□□□ -0.59
SRSF4-205ENST00000497015 IL25Q9H293 177 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 RNPEPQ9H4A4 650 aa11.39□□□□□ -0.59
SRSF4-205ENST00000497015 ENPP3O14638 875 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
SRSF4-205ENST00000497015 PPFIA4O75335 1185 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 CHRNA1P02708 482 aa11.38□□□□□ -0.59
SRSF4-205ENST00000497015 ITGB1P05556 798 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms