RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 A0A1B0GTL3 188 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 FBLN7Q53RD9 439 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 FIGNQ5HY92 759 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 ABHD17CQ6PCB6 329 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 TTLL7Q6ZT98 887 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 NOP9Q86U38 636 aaKnown RBP7.17□□□□□ -1.26
SNX13-211ENST00000496855 PROSER1Q86XN7 944 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 APPBP2Q92624 585 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 PUS7Q96PZ0 661 aaKnown RBP7.17□□□□□ -1.26
SNX13-211ENST00000496855 TMEM209Q96SK2 561 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 SMURF1Q9HCE7 757 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 FANCLQ9NW38 375 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 NTMQ9P121 344 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 WASF3Q9UPY6 502 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 ACOT7O00154 380 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 RFPL3O75679 317 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 NPTXRO95502 500 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 SLURP1P55000 103 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 TCEA2Q15560 299 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 TMC5Q6UXY8 1006 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 EP400NLQ6ZTU2 488 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 CISD2Q8N5K1 135 aaKnown RBP7.17□□□□□ -1.26
SNX13-211ENST00000496855 KCNC2Q96PR1 638 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 LUC7LQ9NQ29 371 aaKnown RBP7.17□□□□□ -1.26
SNX13-211ENST00000496855 RBPJLQ9UBG7 517 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 ATP23Q9Y6H3 246 aa7.17□□□□□ -1.26
SNX13-211ENST00000496855 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 DNAJC8O75937 253 aaPredicted RBP7.16□□□□□ -1.26
SNX13-211ENST00000496855 PTPN1P18031 435 aaKnown RBP7.16□□□□□ -1.26
SNX13-211ENST00000496855 RPL13P26373 211 aaKnown RBP7.16□□□□□ -1.26
SNX13-211ENST00000496855 SARSP49591 514 aaKnown RBP7.16□□□□□ -1.26
SNX13-211ENST00000496855 PABPC4Q13310 644 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNX13-211ENST00000496855 BTBD8Q5XKL5 378 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 C16orf86Q6ZW13 317 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 OVCH1Q7RTY7 1134 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 SP8Q8IXZ3 490 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 CARFQ8N187 725 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 IGSF22Q8N9C0 903 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 CLIC6Q96NY7 704 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 ZCCHC4Q9H5U6 513 aa7.16□□□□□ -1.26
SNX13-211ENST00000496855 FAM90A27PA6NNH2 459 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 B4E1Z4 1266 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 KCNK3O14649 394 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 ASLP04424 464 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 HSP90B1P14625 803 aaKnown RBP7.15□□□□□ -1.27
SNX13-211ENST00000496855 GJA4P35212 333 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 IGFALSP35858 605 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 PRR31Q5SQ13 230 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 CD276Q5ZPR3 534 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 VASNQ6EMK4 673 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 HHIPL2Q6UWX4 724 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 ZSWIM3Q96MP5 696 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 SPATA25Q9BR10 227 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 PARD6AQ9NPB6 346 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 RIC8BQ9NVN3 520 aa7.15□□□□□ -1.27
SNX13-211ENST00000496855 TNPO3Q9Y5L0 923 aaKnown RBP7.15□□□□□ -1.27
SNX13-211ENST00000496855 OPA1O60313 960 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 CLASP2O75122 1294 aaKnown RBP7.14□□□□□ -1.27
SNX13-211ENST00000496855 SASH1O94885 1247 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 SDSP20132 328 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 KCNC1P48547 511 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 TMEM177Q53S58 311 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 ZCCHC8Q6NZY4 707 aaKnown RBP7.14□□□□□ -1.27
SNX13-211ENST00000496855 DDX53Q86TM3 631 aaKnown RBP7.14□□□□□ -1.27
SNX13-211ENST00000496855 DTX3Q8N9I9 347 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 WRNIP1Q96S55 665 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 KRTAP9-9Q9BYP9 154 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 KRTAP9-4Q9BYQ2 154 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 DLL4Q9NR61 685 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 CD2APQ9Y5K6 639 aa7.14□□□□□ -1.27
SNX13-211ENST00000496855 CDC45O75419 566 aa7.13□□□□□ -1.27
SNX13-211ENST00000496855 ZNF460Q14592 562 aa7.13□□□□□ -1.27
SNX13-211ENST00000496855 RTP5Q14D33 572 aa7.13□□□□□ -1.27
SNX13-211ENST00000496855 TKFCQ3LXA3 575 aa7.13□□□□□ -1.27
SNX13-211ENST00000496855 SYT8Q8NBV8 401 aa7.13□□□□□ -1.27
SNX13-211ENST00000496855 CYP7B1O75881 506 aa7.12□□□□□ -1.27
SNX13-211ENST00000496855 ENO2P09104 434 aaPredicted RBP7.12□□□□□ -1.27
SNX13-211ENST00000496855 INHBBP09529 407 aa7.12□□□□□ -1.27
SNX13-211ENST00000496855 DBPQ10586 325 aaPredicted RBP7.12□□□□□ -1.27
SNX13-211ENST00000496855 NOSTRINQ8IVI9 506 aa7.12□□□□□ -1.27
SNX13-211ENST00000496855 SAMD15Q9P1V8 674 aa7.12□□□□□ -1.27
SNX13-211ENST00000496855 MAGEC2Q9UBF1 373 aaPredicted RBP7.12□□□□□ -1.27
SNX13-211ENST00000496855 CROTQ9UKG9 612 aa7.12□□□□□ -1.27
SNX13-211ENST00000496855 TBX22Q9Y458 520 aa7.12□□□□□ -1.27
SNX13-211ENST00000496855 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.11□□□□□ -1.27
SNX13-211ENST00000496855 ZNF839A8K0R7 811 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 M0R2C6 588 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 DDX3XO00571 662 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNX13-211ENST00000496855 ZNF28P17035 718 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 CDK11BP21127 795 aaKnown RBP7.11□□□□□ -1.27
SNX13-211ENST00000496855 PFKPQ01813 784 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 C21orf62-AS1Q17RA5 79 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 SKIDA1Q1XH10 827 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 TTLL10Q6ZVT0 673 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 ZNF761Q86XN6 746 aaPredicted RBP7.11□□□□□ -1.27
SNX13-211ENST00000496855 C2orf69Q8N8R5 385 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 FEZF2Q8TBJ5 459 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 ADAMTS17Q8TE56 1095 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 XYLT2Q9H1B5 865 aa7.11□□□□□ -1.27
SNX13-211ENST00000496855 INTS7Q9NVH2 962 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms