RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ZNF215Q9UL58 517 aaPredicted RBP17.28■□□□□ 0.36
NEK4-206ENST00000496822 NID2Q14112 1375 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 GSTTP1A0A1W2PQM5 241 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 LCHNA4D1U4 455 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 EPOPA6NHQ4 379 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 ADAMTS3O15072 1205 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 CTSHP09668 335 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 IGFBP4P22692 258 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 RPS6KB1P23443 525 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 ADAM17P78536 824 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 GIMAP8Q8ND71 665 aaPredicted RBP17.27■□□□□ 0.36
NEK4-206ENST00000496822 LMBR1Q8WVP7 490 aa17.27■□□□□ 0.36
NEK4-206ENST00000496822 VCANP13611 3396 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 SMCO2A6NFE2 343 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 RSPH10B2B2RC85 870 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 hCG_1984214I3L0E3 225 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 RFXAPO00287 272 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 LGR5O75473 907 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 RSPH10BP0C881 870 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 MARK3P27448 753 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 CLK2P49760 499 aaKnown RBP17.26■□□□□ 0.35
NEK4-206ENST00000496822 ARHGAP4P98171 946 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 TAP1Q03518 808 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 PFKFB3Q16875 520 aaPredicted RBP17.26■□□□□ 0.35
NEK4-206ENST00000496822 ZNF713Q8N859 430 aaPredicted RBP17.26■□□□□ 0.35
NEK4-206ENST00000496822 MXRA8Q9BRK3 442 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 EHMT1Q9H9B1 1298 aa17.26■□□□□ 0.35
NEK4-206ENST00000496822 ABHD14A-ACY1A0A1B0GW23 586 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 TLL1O43897 1013 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 REC8O95072 547 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 ARP10275 920 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 SREBF1P36956 1147 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
NEK4-206ENST00000496822 DBF4BQ8NFT6 615 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 SEPT1Q8WYJ6 367 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 PCYT2Q99447 389 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 AGXT2Q9BYV1 514 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 KCNH7Q9NS40 1196 aa17.25■□□□□ 0.35
NEK4-206ENST00000496822 CUL9Q8IWT3 2517 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 EMSYQ7Z589 1322 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 PPFIA3O75145 1194 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 GNAT1P11488 350 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 SCG2P13521 617 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 ITGB3BPQ13352 177 aaPredicted RBP17.24■□□□□ 0.35
NEK4-206ENST00000496822 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 IKBKEQ14164 716 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 CCDC85BQ15834 202 aaPredicted RBP17.24■□□□□ 0.35
NEK4-206ENST00000496822 PKN1Q16512 942 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 JAKMIP3Q5VZ66 844 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
NEK4-206ENST00000496822 RUFY4Q6ZNE9 571 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 PHKBQ93100 1093 aa17.24■□□□□ 0.35
NEK4-206ENST00000496822 JPH1Q9HDC5 661 aaPredicted RBP17.24■□□□□ 0.35
NEK4-206ENST00000496822 SPTBN5Q9NRC6 3674 aaKnown RBP17.24■□□□□ 0.35
NEK4-206ENST00000496822 NRCAMQ92823 1304 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 CCDC196A0A1B0GTZ2 297 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 KIF28PB7ZC32 967 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 MAFGO15525 162 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 CAND2O75155 1236 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 FOSP01100 380 aaPredicted RBP17.23■□□□□ 0.35
NEK4-206ENST00000496822 PPFIA1Q13136 1202 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 CEP55Q53EZ4 464 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 PLEKHG4Q58EX7 1191 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 FAM117BQ6P1L5 589 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 TEX2Q8IWB9 1127 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 FBXL16Q8N461 479 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 ARNTL2Q8WYA1 636 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 GLG1Q92896 1179 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 ZBTB10Q96DT7 871 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 NCOA5Q9HCD5 579 aaKnown RBP17.23■□□□□ 0.35
NEK4-206ENST00000496822 AGO4Q9HCK5 861 aaKnown RBP17.23■□□□□ 0.35
NEK4-206ENST00000496822 ERAP1Q9NZ08 941 aa17.23■□□□□ 0.35
NEK4-206ENST00000496822 GJB5O95377 273 aa17.22■□□□□ 0.35
NEK4-206ENST00000496822 GRIK4Q16099 956 aa17.22■□□□□ 0.35
NEK4-206ENST00000496822 NTRK3Q16288 839 aa17.22■□□□□ 0.35
NEK4-206ENST00000496822 KRT40Q6A162 431 aa17.22■□□□□ 0.35
NEK4-206ENST00000496822 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
NEK4-206ENST00000496822 ZBED2Q9BTP6 218 aa17.22■□□□□ 0.35
NEK4-206ENST00000496822 SLC9A2Q9UBY0 812 aa17.22■□□□□ 0.35
NEK4-206ENST00000496822 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
NEK4-206ENST00000496822 COL4A4P53420 1690 aaPredicted RBP17.22■□□□□ 0.35
NEK4-206ENST00000496822 NFASCO94856 1347 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 ESYT2A0FGR8 921 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 FAM86B1E9PN63 330 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 MEIS1O00470 390 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 PRPF3O43395 683 aaKnown RBP17.21■□□□□ 0.35
NEK4-206ENST00000496822 EFCAB14O75071 495 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 FAM86B2P0C5J1 330 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 PSMA5P28066 241 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
NEK4-206ENST00000496822 ACTR2P61160 394 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 TOB2Q14106 344 aaPredicted RBP17.21■□□□□ 0.35
NEK4-206ENST00000496822 FAM26DQ5JW98 314 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 MARCH8Q5T0T0 291 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 CRYGNQ8WXF5 182 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 SDF4Q9BRK5 362 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 ZMYND12Q9H0C1 365 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 GLT8D2Q9H1C3 349 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 SMARCAD1Q9H4L7 1026 aa17.21■□□□□ 0.35
NEK4-206ENST00000496822 TUBE1Q9UJT0 475 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms